Evidence map›Paper›PMID 24509844›Full record

ArticleThe Journal of biological chemistry2014

Proteomic analysis of glycine receptor β subunit (GlyRβ)-interacting proteins: evidence for syndapin I regulating synaptic glycine receptors.

Isabel Del Pino, Dennis Koch, Rudolf Schemm, Britta Qualmann, Heinrich Betz, Ingo Paarmann

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 26 citations in OpenAlex.

  1. Molecular Physiology of the Neuronal Synapse.Current issues in molecular biology · 2026
    Review
  2. Review
  3. Review
  4. EHBP1 Is Critically Involved in the Dendritic Arbor Formation and Is Coupled to Factors Promoting Actin Filament Formation.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2024
    Article
  5. Article
  6. Article
  7. Startle Disease: New Molecular Insights into an Old Neurological Disorder.The Neuroscientist : a review journal bringing neurobiology, neurology and psychiatry · 2023
    Review
  8. Article
  9. Article
  10. PACSIN proteins in vivo: Roles in development and physiology.Acta physiologica (Oxford, England) · 2022
    Review
  11. Article
  12. A Novel Glycine Receptor Variant with Startle Disease Affects Syndapin I and Glycinergic Inhibition.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Isabel Del PinoDepartment of Neurochemistry, Max-Planck-Institute for Brain Research, D-60438 Frankfurt/Main.
Dennis KochInstitute for Biochemistry I, Jena University Hospital, Friedrich Schiller University Jena, D-07743 Jena.
Rudolf SchemmDepartment for Theoretical and Computational Biophysics, Max-Planck-Institute for Biophysical Chemistry, D-37077 Göttingen, and.
Britta QualmannInstitute for Biochemistry I, Jena University Hospital, Friedrich Schiller University Jena, D-07743 Jena.
Heinrich BetzDepartment of Neurochemistry, Max-Planck-Institute for Brain Research, D-60438 Frankfurt/Main,; Max-Planck Institute for Medical Research, 69120 Heidelberg, Germany. Electronic address: heinrich.betz@mpimf-heidelberg.mpg.de.
Ingo PaarmannDepartment of Neurochemistry, Max-Planck-Institute for Brain Research, D-60438 Frankfurt/Main,. Electronic address: Ingo.Paarmann@gmx.net.
Max Planck Institute for Brain Research · DEFriedrich Schiller University Jena · DEMax Planck Institute for Biophysical Chemistry · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Glycine receptors (GlyRs) mediate inhibitory neurotransmission in spinal cord and brainstem. They are clustered at inhibitory postsynapses via a tight interaction of their β subunits (GlyRβ) with the scaffolding protein gephyrin. In an attempt to isolate additional proteins interacting with GlyRβ, we performed pulldown experiments with rat brain extracts using a glutathione S-transferase fusion protein encompassing amino acids 378-455 of the large intracellular loop of GlyRβ as bait. This identified syndapin I (SdpI) as a novel interaction partner of GlyRβ that coimmunoprecipitates with native GlyRs from brainstem extracts. Both SdpI and SdpII bound efficiently to the intracellular loop of GlyRβ in vitro and colocalized with GlyRβ upon coexpression in COS-7 cells. The SdpI-binding site was mapped to a proline-rich sequence of 22 amino acids within the intracellular loop of GlyRβ. Deletion and point mutation analysis disclosed that SdpI binding to GlyRβ is Src homology 3 domain-dependent. In cultured rat spinal cord neurons, SdpI immunoreactivity was found to partially colocalize with marker proteins of inhibitory and excitatory synapses. When SdpI was acutely knocked down in cultured spinal cord neurons by viral miRNA expression, postsynaptic GlyR clusters were significantly reduced in both size and number. Similar changes in GlyR cluster properties were found in spinal cultures from SdpI-deficient mice. Our results are consistent with a role of SdpI in the trafficking and/or cytoskeletal anchoring of synaptic GlyRs.

Indexed as

Adaptor Proteins, Signal TransducingAnimalsBrainCarrier ProteinsChlorocebus aethiopsCOS CellsCytoskeletal ProteinsHumansIntracellular Signaling Peptides and ProteinsMiceMice, Mutant StrainsNeuronsNeuropeptidesPhosphoproteinsPoint MutationProtein BindingAdaptor Proteins, Signal TransducingCarrier ProteinsCytoskeletal ProteinsGlrb protein, ratIntracellular Signaling Peptides and ProteinsNeuropeptidesPacsin1 protein, mousePacsin1 protein, ratPhosphoproteinsReceptors, GlycineCys Loop ReceptorsGlycine ReceptorsInhibitory SynapseKnockdownMass Spectrometry (MS)Membrane Protein TraffickingMolecular ModelingProtein-Protein InteractionsSpinal CordSyndapin

Identifiers

PMID24509844
PMCPMC4036276
OpenAlexW1970715918

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.