Evidence map›Paper›PMID 24509082›Full record

ArticleThe Journal of clinical investigation2014

An AXL/LRP-1/RANBP9 complex mediates DC efferocytosis and antigen cross-presentation in vivo.

Manikandan Subramanian, Crystal D Hayes, Joseph J Thome, Edward Thorp, Glenn K Matsushima, Joachim Herz, Donna L Farber, Kang Liu, Madepalli Lakshmana, Ira Tabas

Abstract read
In one paragraph

Article in The Journal of clinical investigation, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 83 papers.

0numbers the graph read from it
0cells of the map it votes in
83citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

83 citing papers in PubMed, 117 citations in OpenAlex.

  1. Article
  2. NLRC5-Deficient Macrophages Promote a Tumor-Permissive Phenotype via AXL- and MERTK-Mediated Efferocytosis.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. RANBP9 and RANBP10 cooperate in regulating non-small cell lung cancer proliferation.Journal of experimental & clinical cancer research : CR · 2025
    Article
  9. Review
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Efferocytosis and Bone Dynamics.Current osteoporosis reports · 2024
    Review
  17. Article
  18. Review
  19. Review
  20. Review

23 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Manikandan Subramanian
Crystal D Hayes
Joseph J Thome
Edward Thorp
Glenn K Matsushima
Joachim Herz
Donna L Farber
Kang Liu
Madepalli Lakshmana
Ira Tabas
Columbia University · USTorrey Pines Institute For Molecular Studies · USNorthwestern University · USThe University of Texas Southwestern Medical Center · USUniversity of North Carolina at Chapel Hill · US

Funding

Transcriptomics and Repertoire ProfilingP01AI106697 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI Donna L. Farber · 2013 to 2026
$31.3M
Regulation and function of plasma lipid transfer proteinsP01HL054591 · NHLBI · ROCKEFELLER UNIVERSITY · PI GOLDBERG, IRA J · 1995 to 2010
$19.9M
The Unfolded Protein Response in Sterol CytoxicityR01HL075662 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI TABAS, IRA A · 2004 to 2017
$5.6M
Efferocytosis-Directed Inflammation Resolution and Repair in the Hypoxic HeartR01HL122309 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI THORP, EDWARD BENJAMIN · 2014 to 2024
$5.0M
Metabolism of the VLDL receptor and ApoE receptor 2R37HL063762 · NHLBI · UT SOUTHWESTERN MEDICAL CENTER · PI HERZ, JOACHIM J · 2010 to 2019
$4.0M
Understand the Role of Meningeal Dendritic Cells in CNS Anti-viral ImmunityR01AI101251 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LIU, KANG · 2013 to 2017
$2.0M
Autophagy in Advanced AtherosclerosisR01HL106019 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI TABAS, IRA A · 2011 to 2014
$1.8M
Mechanisms of Defective Efferocytosis in AtherosclerosisR01HL107497 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI TABAS, IRA A · 2012 to 2015
$1.6M
Role of RanBP9 on dendritic and spine injury in an Alzheimer's mouse modelR01AG036859 · NIA · TORREY PINES INST FOR MOLECULAR STUDIES · PI LAKSHMANA, MADEPALLI KRISHNAPPA · 2010 to 2013
$1.1M
Becton Dickinson LSR II Analytical Flow CytometerS10RR027050 · NCRR · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI CLYNES, RAPHAEL A. · 2011 to 2011
$413k
Longevity and turnover of human naive T cells in lymphoid tissueF31AG047003 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI THOME, JOSEPH JOHN-CHARLES · 2013 to 2015
$109k
NCRR NIH HHS S10 RR027050NHLBI NIH HHS HL054591NHLBI NIH HHS HL075662NHLBI NIH HHS HL106019NHLBI NIH HHS P01 HL054591NHLBI NIH HHS R01 HL075662NHLBI NIH HHS R01 HL106019NHLBI NIH HHS R01 HL107497NHLBI NIH HHS R37 HL063762NIAID NIH HHS AI101251NIAID NIH HHS AI106697NIAID NIH HHS P01 AI106697NIAID NIH HHS R01 AI101251NIA NIH HHS AG036859NIA NIH HHS F31 AG047003NIA NIH HHS R01 AG036859
6 · The paper itself

Abstract

The phagocytosis of apoptotic cells (ACs), or efferocytosis, by DCs is critical for self-tolerance and host defense. Although many efferocytosis-associated receptors have been described in vitro, the functionality of these receptors in vivo has not been explored in depth. Using a spleen efferocytosis assay and targeted genetic deletion in mice, we identified a multiprotein complex--composed of the receptor tyrosine kinase AXL, LDL receptor-related protein-1 (LRP-1), and RAN-binding protein 9 (RANBP9)--that mediates DC efferocytosis and antigen cross-presentation. We found that AXL bound ACs, but required LRP-1 to trigger internalization, in murine CD8α+ DCs and human-derived DCs. AXL and LRP-1 did not interact directly, but relied on RANBP9, which bound both AXL and LRP-1, to form the complex. In a coculture model of antigen presentation, the AXL/LRP-1/RANBP9 complex was used by DCs to cross-present AC-associated antigens to T cells. Furthermore, in a murine model of herpes simplex virus-1 infection, mice lacking DC-specific LRP-1, AXL, or RANBP9 had increased AC accumulation, defective viral antigen-specific CD8+ T cell activation, enhanced viral load, and decreased survival. The discovery of this multiprotein complex that mediates functionally important DC efferocytosis in vivo may have implications for future studies related to host defense and DC-based vaccines.

Indexed as

ApoptosisCross-PrimingAdaptor Proteins, Signal TransducingAnimalsAntigen PresentationAxl Receptor Tyrosine KinaseCD8-Positive T-LymphocytesCoculture TechniquesCytoskeletal ProteinsDendritic CellsFemaleHepatitis A Virus Cellular Receptor 2Herpesviridae InfectionsHerpesvirus 1, HumanHumansJurkat CellsAdaptor Proteins, Signal TransducingAxl Receptor Tyrosine KinaseCytoskeletal ProteinsHavcr2 protein, mouseHepatitis A Virus Cellular Receptor 2Low Density Lipoprotein Receptor-Related Protein-1Lrp1 protein, mouseMultiprotein ComplexesNuclear ProteinsProto-Oncogene ProteinsRan binding protein 9Receptor Protein-Tyrosine KinasesReceptors, LDLReceptors, VirusTumor Suppressor Proteins

Identifiers

PMID24509082
PMCPMC3934164
OpenAlexW2132626958

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.