Evidence map›Paper›PMID 24508568›Full record

ArticleProtein expression and purification2014

Preparation, crystallization, and preliminary crystallographic analysis of wild-type and mutant human TREM-2 ectodomains linked to neurodegenerative and inflammatory diseases.

Daniel L Kober, Kelsey M Wanhainen, Britney M Johnson, David T Randolph, Michael J Holtzman, Tom J Brett

Abstract read
In one paragraph

Article in Protein expression and purification, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Roles of TREM2 in Alzheimer's disease.Translational neurodegeneration · 2025
    Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. TREM2 in Neurodegenerative Diseases.Molecular neurodegeneration · 2017
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Daniel L KoberMolecular Microbiology and Microbial Pathogenesis Program, Washington University School of Medicine, St. Louis, MO 63110, United States; Department of Internal Medicine, Washington University School of Medicine, St. Louis, MO 63110, United States.
Kelsey M WanhainenDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, MO 63110, United States.
Britney M JohnsonBiochemistry Program, Washington University School of Medicine, St. Louis, MO 63110, United States.
David T RandolphDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, MO 63110, United States.
Michael J HoltzmanDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, MO 63110, United States; Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO 63110, United States; Drug Discovery Program in Pulmonary and Critical Care Medicine, Washington University School of Medicine, St. Louis, MO 63110, United States.
Tom J BrettDepartment of Internal Medicine, Washington University School of Medicine, St. Louis, MO 63110, United States; Biochemistry and Molecular Biophysics, Washington University School of Medicine, St. Louis, MO 63110, United States; Cell Biology and Physiology, Washington University School of Medicine, St. Louis, MO 63110, United States; Drug Discovery Program in Pulmonary and Critical Care Medicine, Washington University School of Medicine, St. Louis, MO 63110, United States. Electronic address: tbrett@wustl.edu.

Funding

TRAINING PROGRAM IN CELLULAR AND MOLECULAR BIOLOGYT32GM007067 · NIGMS · WASHINGTON UNIVERSITY · PI TRUE-KROB, HEATHER L · 1985 to 2020
$20.4M
Tissue and Cell Processing CoreU19AI070489 · NIAID · WASHINGTON UNIVERSITY · PI HOLTZMAN, MICHAEL J · 2006 to 2016
$17.9M
STRUCTURAL REGULATION OF CLCA1 ACTIVITYR01HL119813 · NHLBI · WASHINGTON UNIVERSITY · PI BRETT, THOMAS JOHN · 2013 to 2017
$1.9M
NHLBI NIH HHS R01 HL119813NHLBI NIH HHS R01-HL119813NIAID NIH HHS U19 AI070489NIAID NIH HHS U19-AI070489NIGMS NIH HHS T32 GM007067
6 · The paper itself

Abstract

TREM-2 (triggering receptor expressed on myeloid cells-2) is an innate immune receptor expressed on dendritic cells, macrophages, osteoclasts, and microglia. Recent genetic studies have reported the occurrence of point mutations in TREM-2 that correlate with a dramatically increased risk for the development of neurodegenerative diseases, including Alzheimer's disease, frontotemporal dementia, and Parkinson's disease. Structural and biophysical studies of wild-type and mutant TREM-2 ectodomains are required to understand the functional consequences of these mutations. In order to facilitate these studies, we undertook the production and crystallization of these proteins. Here we demonstrate that, unlike many single Ig domain proteins, TREM-2 could not be readily refolded from bacterially-expressed inclusion bodies. Instead, we developed a mammalian-cell based expression system for the successful production of wild-type and mutant TREM-2 proteins in milligram quantities and a single-chromatography-step purification scheme that produced diffraction-quality crystals. These crystals diffract to a resolution of 3.3 Å and produce data sufficient for structure determination. We describe herein the procedures to produce wild-type and mutant human TREM-2 Ig domains in sufficient quantities for structural and biophysical studies. Such studies are crucial to understand the functional consequences of TREM-2 point mutations linked to the development of neurodegenerative diseases and, ultimately, to develop patient-specific molecular therapies to treat them.

Indexed as

Cloning, MolecularCrystallography, X-RayGene ExpressionHumansInflammationMembrane GlycoproteinsMutationNeurodegenerative DiseasesProtein FoldingProtein Structure, TertiaryReceptors, ImmunologicMembrane GlycoproteinsReceptors, ImmunologicTREM2 protein, humanAlzheimer’s diseaseCrystallographyInflammationInnate immunityNeurodegenerative diseaseParkinson’s diseaseReceptor

Identifiers

PMID24508568
PMCPMC3980731

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.