Evidence map›Paper›PMID 24507593›Full record

ArticleBiophysical journal2014

Determinants of fluidlike behavior and effective viscosity in cross-linked actin networks.

Taeyoon Kim, Margaret L Gardel, Ed Munro

Abstract read
In one paragraph

Article in Biophysical journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

  1. Article
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  9. Article
  10. Nonlinear Elastic and Inelastic Properties of Cells.Journal of biomechanical engineering · 2020
    Review
  11. Article
  12. Article
  13. Article
  14. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Taeyoon KimWeldon School of Biomedical Engineering, Purdue University, West Lafayette, Indiana.
Margaret L GardelInstitute for Biophysical Dynamics, James Franck Institute, and Department of Physics, University of Chicago, Chicago, Illinois. Electronic address: gardel@uchicago.edu.
Ed MunroInstitute for Biophysical Dynamics, Computation Institute, and Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, Illinois. Electronic address: emunro@uchicago.edu.

Funding

Beagle: A Supercomputer for Computational Biology, Simulation, and Data AnalysisS10RR029030 · NCRR · UNIVERSITY OF CHICAGO · PI FOSTER, IAN · 2010 to 2010
$7.0M
Dynamics and regulation of actomyosin contractility in the C. elegans embryoR01GM098441 · NIGMS · UNIVERSITY OF CHICAGO · PI MUNRO, EDWIN MARSHALL · 2011 to 2020
$2.9M
NCRR NIH HHS S10 RR029030NCRR NIH HHS S10 RR029030-01NIGMS NIH HHS R01 GM098441NIGMS NIH HHS R01 GM098441-03
6 · The paper itself

Abstract

The actin cortex has a well-documented ability to rapidly remodel and flow while maintaining long-range connectivity, but how this is achieved remains poorly understood. Here, we use computer simulations to explore how stress relaxation in cross-linked actin networks subjected to extensional stress depends on the interplay between network architecture and turnover. We characterize a regime in which a network response is nonaffine and stress relaxation is governed by the continuous dissipation of elastic energy via cyclic formation, elongation, and turnover of tension-bearing elements. Within this regime, for a wide range of network parameters, we observe a constant deformation (creep) rate that is linearly proportional to the rate of filament turnover, leading to a constant effective viscosity that is inversely proportional to turnover rate. Significantly, we observe a biphasic dependence of the creep rate on applied stress: below a critical stress threshold, the creep rate increases linearly with applied stress; above that threshold, the creep rate becomes independent of applied stress. We show that this biphasic stress dependence can be understood in terms of the nonlinear force-extension behavior of individual force-transmitting network elements. These results have important implications for understanding the origins and control of viscous flows both in the cortex of living cells and in other polymer networks.

Indexed as

Molecular Dynamics SimulationPolymerizationActin Capping ProteinsActin CytoskeletonActinsAnimalsElasticityHumansViscosityActin Capping ProteinsActins

Identifiers

PMID24507593
PMCPMC3944977

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.