Evidence map›Paper›PMID 24505435›Full record

ArticlePloS one2014

Chimeras of p14ARF and p16: functional hybrids with the ability to arrest growth.

Richard T Williams, Lisa M Barnhill, Huan-Hsien Kuo, Wen-Der Lin, Ayse Batova, Alice L Yu, Mitchell B Diccianni

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

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  10. Aberrant Expression of p14Tumor & microenvironment
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Richard T WilliamsDepartment of Pediatric Hematology/Oncology, University of California San Diego, San Diego, California, United States of America.
Lisa M BarnhillDepartment of Pediatric Hematology/Oncology, University of California San Diego, San Diego, California, United States of America.
Huan-Hsien KuoGenomics Research Center, Academia Sinica, Taipei, Taiwan.
Wen-Der LinGenomics Research Center, Academia Sinica, Taipei, Taiwan.
Ayse BatovaDepartment of Chemistry and Biochemistry, University of California San Diego, La Jolla, California, United States of America.
Alice L YuDepartment of Pediatric Hematology/Oncology, University of California San Diego, San Diego, California, United States of America.
Mitchell B DiccianniDepartment of Pediatric Hematology/Oncology, University of California San Diego, San Diego, California, United States of America.
University of California, San Diego · USGenomics Research Center, Academia Sinica · TW

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DIANE M SIMEONE · 1985 to 2026
$124.9M
Predicting toxicity and success of anti-GD2 immunotherapy of neuroblastomaR01CA164132 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI YU, ALICE L. · 2012 to 2014
$936k
NCI NIH HHS 1R01CA164132-01NCI NIH HHS 2P30CA023100-23NCI NIH HHS P30 CA023100NCI NIH HHS R01 CA164132
6 · The paper itself

Abstract

The INK4A locus codes for two independent tumor suppressors, p14ARF and p16/CDKN2A, and is frequently mutated in many cancers. Here we report a novel deletion/substitution from CC to T in the shared exon 2 of p14ARF/p16 in a melanoma cell line. This mutation aligns the reading frames of p14ARF and p16 mid-transcript, producing one protein which is half p14ARF and half p16, chimera ARF (chARF), and another which is half p16 and half non-p14ARF/non-p16 amino acids, p16-Alternate Carboxyl Terminal (p16-ACT). In an effort to understand the cellular impact of this novel mutation and others like it, we expressed the two protein products in a tumor cell line and analyzed common p14ARF and p16 pathways, including the p53/p21 and CDK4/cyclin D1 pathways, as well as the influence of the two proteins on growth and the cell cycle. We report that chARF mimicked wild-type p14ARF by inducing the p53/p21 pathway, inhibiting cell growth through G2/M arrest and maintaining a certain percentage of cells in G1 during nocodazole-induced G2 arrest. chARF also demonstrated p16 activity by binding CDK4. However, rather than preventing cyclin D1 from binding CDK4, chARF stabilized this interaction through p21 which bound CDK4. p16-ACT had no p16-related function as it was unable to inhibit cyclin D1/CDK4 complex formation and was unable to arrest the cell cycle, though it did inhibit colony formation. We conclude that these novel chimeric proteins, which are very similar to predicted p16/p14ARF chimeric proteins found in other primary cancers, result in maintained p14ARF-p53-p21 signaling while p16-dependent CDK4 inhibition is lost.

Indexed as

Cell ProliferationBase SequenceCell CycleCell Line, TumorCyclin D1Cyclin-Dependent Kinase 4Cyclin-Dependent Kinase Inhibitor p16ExonsHumansMelanomaMutant Chimeric ProteinsMutationTumor Suppressor Protein p14ARFTumor Suppressor Protein p53Cyclin D1Cyclin-Dependent Kinase 4Cyclin-Dependent Kinase Inhibitor p16Mutant Chimeric ProteinsTumor Suppressor Protein p14ARFTumor Suppressor Protein p53

Identifiers

PMID24505435
PMCPMC3914946
OpenAlexW1988583371

What OpenQuestion holds

Textmetadata
LicenceCC0
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.