Evidence map›Paper›PMID 24504540›Full record

ArticlePhotosynthesis research2014

Theoretical characterization of excitation energy transfer in chlorosome light-harvesting antennae from green sulfur bacteria.

Takatoshi Fujita, Joonsuk Huh, Semion K Saikin, Jennifer C Brookes, Alán Aspuru-Guzik

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Photosynthesis research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Contrasting Modes of Self-Assembly and Hydrogen-Bonding Heterogeneity in Chlorosomes ofThe journal of physical chemistry. C, Nanomaterials and interfaces · 2018
    Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Takatoshi FujitaDepartment of Chemistry and Chemical Biology, Harvard University, Cambridge, MA, 02138, USA, tfujita@fas.harvard.edu.
Joonsuk Huh
Semion K Saikin
Jennifer C Brookes
Alán Aspuru-Guzik
Harvard University · USUniversity College London · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present a theoretical study of excitation dynamics in the chlorosome antenna complex of green photosynthetic bacteria based on a recently proposed model for the molecular assembly. Our model for the excitation energy transfer (EET) throughout the antenna combines a stochastic time propagation of the excitonic wave function with molecular dynamics simulations of the supramolecular structure and electronic structure calculations of the excited states. We characterized the optical properties of the chlorosome with absorption, circular dichroism and fluorescence polarization anisotropy decay spectra. The simulation results for the excitation dynamics reveal a detailed picture of the EET in the chlorosome. Coherent energy transfer is significant only for the first 50 fs after the initial excitation, and the wavelike motion of the exciton is completely damped at 100 fs. Characteristic time constants of incoherent energy transfer, subsequently, vary from 1 ps to several tens of ps. We assign the time scales of the EET to specific physical processes by comparing our results with the data obtained from time-resolved spectroscopy experiments.

Indexed as

Energy TransferMolecular Dynamics SimulationAnisotropyBacterial ProteinsBacteriochlorophyllsChlorobiLightLight-Harvesting Protein ComplexesOrganic Chemicals6-(Dimethylamino)-2-((1E,3E)-4-(4-(dimethylamino)phenyl)-1,3-butadien-1-yl)-1-ethylquinolinium perchlorateBacterial ProteinsBacteriochlorophyllsLight-Harvesting Protein ComplexesOrganic Chemicals

Identifiers

PMID24504540
OpenAlexW1969767860

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.