Evidence map›Paper›PMID 24504480›Full record

ArticleNature protocols2014

Derivation and characterization of mouse embryonic stem cells from permissive and nonpermissive strains.

Anne Czechanski, Candice Byers, Ian Greenstein, Nadine Schrode, Leah Rae Donahue, Anna-Katerina Hadjantonakis, Laura G Reinholdt

Abstract read
In one paragraph

Article in Nature protocols, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 112 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
112citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

112 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  13. bioRxiv : the preprint server for biology · 2025
    Article
  14. Low-coverage whole-genome sequencing facilitates accurate and cost-effective haplotype reconstruction in complex mouse crosses.Mammalian genome : official journal of the International Mammalian Genome Society · 2025
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52 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Anne CzechanskiGenetic Resource Science, The Jackson Laboratory, Bar Harbor, Maine, USA.
Candice ByersGenetic Resource Science, The Jackson Laboratory, Bar Harbor, Maine, USA.
Ian GreensteinGenetic Resource Science, The Jackson Laboratory, Bar Harbor, Maine, USA.
Nadine SchrodeDevelopmental Biology Program, Sloan-Kettering Institute, New York, New York, USA.
Leah Rae DonahueGenetic Resource Science, The Jackson Laboratory, Bar Harbor, Maine, USA.
Anna-Katerina HadjantonakisDevelopmental Biology Program, Sloan-Kettering Institute, New York, New York, USA.
Laura G ReinholdtGenetic Resource Science, The Jackson Laboratory, Bar Harbor, Maine, USA.

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
The Mutant Mouse Resource and Research Center at The Jackson LaboratoryU42OD010921 · OD · JACKSON LABORATORY · PI LAURA G REINHOLDT · 2012 to 2026
$21.4M
Use for ResourceP40OD011102 · OD · JACKSON LABORATORY · PI Steven Carmen Munger, Stephen A Murray · 2012 to 2026
$15.0M
Morphogenesis of the paraxial mesoderm in miceR01HD052115 · NICHD · SLOAN-KETTERING INST CAN RESEARCH · PI HADJANTONAKIS, ANNA-KATERINA · 2006 to 2015
$4.1M
Morphogenesis of mammalian gut endodermR01DK084391 · NIDDK · SLOAN-KETTERING INST CAN RESEARCH · PI HADJANTONAKIS, ANNA-KATERINA · 2009 to 2018
$4.1M
NCI NIH HHS P30 CA034196NICHD NIH HHS R01 HD052115NICHD NIH HHS R01-HD052115NIDDK NIH HHS R01 DK084391NIDDK NIH HHS R01-DK084391NIH HHS P40 OD011102NIH HHS U42 OD010921NIH HHS U42-OD010921NIH HHS U42-OD011102
6 · The paper itself

Abstract

Mouse embryonic stem cells (mESCs) are key tools for genetic engineering, development of stem cell-based therapies and basic research on pluripotency and early lineage commitment. However, successful derivation of germline-competent embryonic stem cell lines has, until recently, been limited to a small number of inbred mouse strains. Recently, there have been considerable advances in the field of embryonic stem cell biology, particularly in the area of pluripotency maintenance in the epiblast from which the mESCs are derived. Here we describe a protocol for efficient derivation of germline-competent mESCs from any mouse strain, including strains previously deemed nonpermissive. We provide a protocol that is generally applicable to most inbred strains, as well as a variant for nonpermissive strains. By using this protocol, mESCs can be derived in 3 weeks and fully characterized after an additional 12 weeks, at efficiencies as high as 90% and in any strain background.

Indexed as

AnimalsCell Culture TechniquesCell LineEmbryonic Stem CellsFemaleMicePluripotent Stem CellsPregnancy

Identifiers

PMID24504480
PMCPMC4112089

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.