Evidence map›Paper›PMID 24500693›Full record

ArticleAmerican journal of physiology. Renal physiology2014

Dicer function is required in the metanephric mesenchyme for early kidney development.

Jessica Y S Chu, Sunder Sims-Lucas, Daniel S Bushnell, Andrew J Bodnar, Jordan A Kreidberg, Jacqueline Ho

Abstract read
In one paragraph

Article in American journal of physiology. Renal physiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Loss ofAmerican journal of physiology. Renal physiology · 2019
    Article
  8. Article
  9. Article
  10. Review
  11. FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2017
    Article
  12. MicroRNAs as Master Regulators of Glomerular Function in Health and Disease.Journal of the American Society of Nephrology : JASN · 2017
    Review
  13. Article
  14. Six2 Is a Coordinator of LiCl-Induced Cell Proliferation and Apoptosis.International journal of molecular sciences · 2016
    Article
  15. Targeted sequencing of 96 renal developmental microRNAs in 1213 individuals from 980 families with congenital anomalies of the kidney and urinary tract.Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association · 2016
    Article
  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Jessica Y S ChuDiv. of Nephrology, Dept. of Pediatrics, Children's Hospital of Pittsburgh of UPMC, Rangos Research Center, 4401 Penn Ave., Pittsburgh, PA 15224. jacqueline.ho2@chp.edu.
Sunder Sims-Lucas
Daniel S Bushnell
Andrew J Bodnar
Jordan A Kreidberg
Jacqueline Ho
University of Pittsburgh · USHarvard University · US

Funding

BMP and FGF Signaling in kidney progenitor cellsR01DK087794 · NIDDK · BOSTON CHILDREN'S HOSPITAL · PI KREIDBERG, JORDAN A · 2010 to 2013
$1.5M
MicroRNAs in Kidney Progenitor Cells.R00DK087922 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HO, JACQUELINE · 2012 to 2014
$722k
Renal Stroma Derived Endothelial Precursors are Critical for Renal DevelopmentK01DK096996 · NIDDK · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI SIMS-LUCAS, SUNDER · 2013 to 2017
$557k
NIDDK NIH HHS K01 DK096996NIDDK NIH HHS R00 DK087922NIDDK NIH HHS R01 DK087794
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are small, noncoding regulatory RNAs that act as posttranscriptional repressors by binding to the 3'-untranslated region (3'-UTR) of target genes. They require processing by Dicer, an RNase III enzyme, to become mature regulatory RNAs. Previous work from our laboratory revealed critical roles for miRNAs in nephron progenitors at midgestation (Ho J, Pandey P, Schatton T, Sims-Lucas S, Khalid M, Frank MH, Hartwig S, Kreidberg JA. J Am Soc Nephrol 22: 1053-1063, 2011). To interrogate roles for miRNAs in the early metanephric mesenchyme, which gives rise to nephron progenitors as well as the renal stroma during kidney development, we conditionally ablated Dicer function in this lineage. Despite normal ureteric bud outgrowth and condensation of the metanephric mesenchyme to form nephron progenitors, early loss of miRNAs in the metanephric mesenchyme resulted in severe renal dysgenesis. Nephron progenitors are initially correctly specified in the mutant kidneys, with normal expression of several transcription factors known to be critical in progenitors, including Six2, Pax2, Sall1, and Wt1. However, there is premature loss of the nephron progenitor marker Cited1, marked apoptosis, and increased expression of the proapoptotic protein Bim shortly after the initial inductive events in early kidney development. Subsequently, there is a failure in ureteric bud branching and nephron progenitor differentiation. Taken together, our data demonstrate a previously undetermined requirement for miRNAs during early kidney organogenesis and indicate a crucial role for miRNAs in regulating the survival of this lineage.

Indexed as

AnimalsApoptosisApoptosis Regulatory ProteinsBcl-2-Like Protein 11DEAD-box RNA HelicasesEmbryonic Stem CellsGene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicGestational AgeKidneyMembrane ProteinsMesodermMiceMice, KnockoutMicroRNAsNephronsApoptosis Regulatory ProteinsBcl2l11 protein, mouseBcl-2-Like Protein 11Cited1 protein, mouseDEAD-box RNA HelicasesDicer1 protein, mouseMembrane ProteinsMicroRNAsNuclear ProteinsProto-Oncogene ProteinsRibonuclease IIITrans-ActivatorsDicerkidney developmentmicroRNA

Identifiers

PMID24500693
PMCPMC3962603
OpenAlexW1972962169

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.