Evidence map›Paper›PMID 24498449›Full record

ArticlePLoS neglected tropical diseases2014

First detection of Mycobacterium ulcerans DNA in environmental samples from South America.

Aaron Morris, Rodolphe Gozlan, Estelle Marion, Laurent Marsollier, Demetra Andreou, Daniel Sanhueza, Rolland Ruffine, Pierre Couppié, Jean-François Guégan

Open access · goldAbstract read
In one paragraph

Article in PLoS neglected tropical diseases, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
3.6field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 37 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 7 institutions in 3 countries.

Aaron MorrisUniversity of Bournemouth, School of Applied Sciences, Dorset, United Kingdom ; UMR MIVEGEC IRD-CNRS-Universités de Montpellier 1 et 2, Centre IRD de Montpellier, Montpellier, France.
Rodolphe GozlanUMR MIVEGEC IRD-CNRS-Universités de Montpellier 1 et 2, Centre IRD de Montpellier, Montpellier, France ; UMR BOREA IRD-MNHN-Université Pierre et Marie Curie, Muséum National d'Histoire Naturelle, Paris, France.
Estelle MarionEquipe Inserm Avenir ATOMycA, CRCNA INSERM U892 and CNRS U6299, Université et CHU d'Angers, Angers, France.
Laurent MarsollierEquipe Inserm Avenir ATOMycA, CRCNA INSERM U892 and CNRS U6299, Université et CHU d'Angers, Angers, France.
Demetra AndreouUniversity of Bournemouth, School of Applied Sciences, Dorset, United Kingdom.
Daniel SanhuezaUMR MIVEGEC IRD-CNRS-Universités de Montpellier 1 et 2, Centre IRD de Montpellier, Montpellier, France ; Equipe Inserm Avenir ATOMycA, CRCNA INSERM U892 and CNRS U6299, Université et CHU d'Angers, Angers, France.
Rolland RuffineUMR MIVEGEC IRD-CNRS-Universités de Montpellier 1 et 2, Centre IRD de Montpellier, Montpellier, France.
Pierre CouppiéInstitut Guyanais de Dermatologie Tropicale, EA 2188, Centre Hospitalier André Rosemon, Cayenne, French Guiana.
Jean-François GuéganUMR MIVEGEC IRD-CNRS-Universités de Montpellier 1 et 2, Centre IRD de Montpellier, Montpellier, France.
Agropolis International · FRBournemouth University · GBBiologie des Organismes et Écosystèmes Aquatiques · FRCentre de Recherche en Cancérologie et Immunologie Intégrée Nantes Angers · FRInstitut d’Epidémiologie Neurologique et de Neurologie Tropicale · FRInstitut de Recherche pour le Développement · FRUniversité d'Angers · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The occurrences of many environmentally-persistent and zoonotic infections are driven by ecosystem changes, which in turn are underpinned by land-use modifications that alter the governance of pathogen, biodiversity and human interactions. Our current understanding of these ecological changes on disease emergence however remains limited. Buruli ulcer is an emerging human skin disease caused by the mycobacterium, Mycobacterium ulcerans, for which the exact route of infection remains unclear. It can have a devastating impact on its human host, causing extensive necrosis of the skin and underlying tissue, often leading to permanent disability. The mycobacterium is associated with tropical aquatic environments and incidences of the disease are significantly higher on floodplains and where there is an increase of human aquatic activities. Although the disease has been previously diagnosed in South America, until now the presence of M. ulcerans DNA in the wild has only been identified in Australia where there have been significant outbreaks and in western and central regions of Africa where the disease is persistent. Here for the first time, we have identified the presence of the aetiological agent's DNA in environmental samples from South America. The DNA was positively identified using Real-time Polymerase Chain Reaction (PCR) on 163 environmental samples, taken from 23 freshwater bodies in French Guiana (Southern America), using primers for both IS2404 and for the ketoreductase-B domain of the M. ulcerans mycolactone polyketide synthase genes (KR). Five samples out of 163 were positive for both primers from three different water bodies. A further nine sites had low levels of IS2404 close to a standard CT of 35 and could potentially harbour M. ulcerans. The majority of our positive samples (8/14) came from filtered water. These results also reveal the Sinnamary River as a potential source of infection to humans.

Indexed as

Bacterial ProteinsDNA, BacterialDNA PrimersDNA Transposable ElementsFrench GuianaFresh WaterHumansMycobacterium ulceransReal-Time Polymerase Chain ReactionBacterial ProteinsDNA, BacterialDNA PrimersDNA Transposable Elements

Identifiers

PMID24498449
PMCPMC3907311
OpenAlexW2077617784

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.