Evidence map›Paper›PMID 24498029›Full record

ArticlePloS one2014

Mapping of the gynoecy in bitter gourd (Momordica charantia) using RAD-seq analysis.

Hideo Matsumura, Norimichi Miyagi, Naoki Taniai, Mai Fukushima, Kazuhiko Tarora, Ayano Shudo, Naoya Urasaki

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 68 citations in OpenAlex.

  1. Identification ofFrontiers in plant science · 2026
    Article
  2. Article
  3. Article
  4. Fine-mapping and candidate gene analysis of the Mcgy1 locus responsible for gynoecy in bitter gourd (Momordica spp.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2023
    Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Long-read bitter gourd (Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  15. A CIN-like TCP transcription factor (Horticulture research · 2020
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Hideo MatsumuraGene Research Center, Shinshu University, Ueda, Nagano, Japan.
Norimichi MiyagiOkinawa Prefectural Agriculture Research Center, Itoman, Okinawa, Japan.
Naoki TaniaiOkinawa Prefectural Agriculture Research Center, Itoman, Okinawa, Japan.
Mai FukushimaGene Research Center, Shinshu University, Ueda, Nagano, Japan.
Kazuhiko TaroraOkinawa Prefectural Agriculture Research Center, Itoman, Okinawa, Japan.
Ayano ShudoOkinawa Prefectural Agriculture Research Center, Itoman, Okinawa, Japan.
Naoya UrasakiOkinawa Prefectural Agriculture Research Center, Itoman, Okinawa, Japan.
Okinawa Prefectural Agricultural Research Center · JPShinshu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Momordica charantia is a monoecious plant of the Cucurbitaceae family that has both male and female unisexual flowers. Its unique gynoecious line, OHB61-5, is essential as a maternal parent in the production of F1 cultivars. To identify the DNA markers for this gynoecy, a RAD-seq (restriction-associated DNA tag sequencing) analysis was employed to reveal genome-wide DNA polymorphisms and to genotype the F2 progeny from a cross between OHB61-5 and a monoecious line. Based on a RAD-seq analysis of F2 individuals, a linkage map was constructed using 552 co-dominant markers. In addition, after analyzing the pooled genomic DNA from monoecious or gynoecious F2 plants, several SNP loci that are genetically linked to gynoecy were identified. GTFL-1, the closest SNP locus to the putative gynoecious locus, was converted to a conventional DNA marker using invader assay technology, which is applicable to the marker-assisted selection of gynoecy in M. charantia breeding.

Indexed as

Base SequenceChromosome MappingGenetic LinkageGenetic MarkersGenome, PlantGenotypeMolecular Sequence DataMomordica charantiaPolymorphism, Single NucleotideSequence Analysis, DNAGenetic Markers

Identifiers

PMID24498029
PMCPMC3907450
OpenAlexW1973691912

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.