Evidence map›Paper›PMID 24497836›Full record

ArticlePLoS genetics2014

Loss of histone H3 methylation at lysine 4 triggers apoptosis in Saccharomyces cerevisiae.

David Walter, Anja Matter, Birthe Fahrenkrog

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.6field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Set1 promotes Notch-induced transcriptional activation.Cellular and molecular life sciences : CMLS · 2026
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  4. Review
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  6. Review
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  9. Article
  10. Review
  11. Review
  12. Is There a Histone Code for Cellular Quiescence?Frontiers in cell and developmental biology · 2021
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. The Epigenetic Pathways to Ribosomal DNA Silencing.Microbiology and molecular biology reviews : MMBR · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 2 countries.

David WalterM.E. Müller Institute for Structural Biology, Biozentrum, University of Basel, Basel, Switzerland.
Anja MatterM.E. Müller Institute for Structural Biology, Biozentrum, University of Basel, Basel, Switzerland.
Birthe FahrenkrogM.E. Müller Institute for Structural Biology, Biozentrum, University of Basel, Basel, Switzerland ; Institute for Molecular Biology and Medicine, Université Libre de Bruxelles, Charleroi, Belgium.
University of Basel · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Monoubiquitination of histone H2B lysine 123 regulates methylation of histone H3 lysine 4 (H3K4) and 79 (H3K79) and the lack of H2B ubiquitination in Saccharomyces cerevisiae coincides with metacaspase-dependent apoptosis. Here, we discovered that loss of H3K4 methylation due to depletion of the methyltransferase Set1p (or the two COMPASS subunits Spp1p and Bre2p, respectively) leads to enhanced cell death during chronological aging and increased sensitivity to apoptosis induction. In contrast, loss of H3K79 methylation due to DOT1 disruption only slightly affects yeast survival. SET1 depleted cells accumulate DNA damage and co-disruption of Dot1p, the DNA damage adaptor protein Rad9p, the endonuclease Nuc1p, and the metacaspase Yca1p, respectively, impedes their early death. Furthermore, aged and dying wild-type cells lose H3K4 methylation, whereas depletion of the H3K4 demethylase Jhd2p improves survival, indicating that loss of H3K4 methylation is an important trigger for cell death in S. cerevisiae. Given the evolutionary conservation of H3K4 methylation this likely plays a role in apoptosis regulation in a wide range of organisms.

Indexed as

ApoptosisCell SurvivalDNA DamageHistone-Lysine N-MethyltransferaseHistonesJumonji Domain-Containing Histone DemethylasesLysineMethylationNuclear ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinationDot1 protein, S cerevisiaeHistone-Lysine N-MethyltransferaseHistonesJHD2 protein, S cerevisiaeJumonji Domain-Containing Histone DemethylasesLysineNuclear ProteinsSaccharomyces cerevisiae ProteinsSET1 protein, S cerevisiae

Identifiers

PMID24497836
PMCPMC3907299
OpenAlexW1973129094

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.