Evidence map›Paper›PMID 24497545›Full record

ArticleeLife2014

Super Spy variants implicate flexibility in chaperone action.

Shu Quan, Lili Wang, Evgeniy V Petrotchenko, Karl At Makepeace, Scott Horowitz, Jianyi Yang, Yang Zhang, Christoph H Borchers, James Ca Bardwell

Open access · goldAbstract readComparative Study
In one paragraph

Article in eLife, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 57 citations in OpenAlex.

  1. Article
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  3. Review
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  7. Article
  8. Review
  9. Review
  10. Article
  11. Article
  12. How do Chaperones Bind (Partly) Unfolded Client Proteins?Frontiers in molecular biosciences · 2021
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Identifying dynamic, partially occupied residues using anomalous scattering.Acta crystallographica. Section D, Structural biology · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Shu QuanDepartment of Molecular, Cellular, and Developmental Biology, Howard Hughes Medical Institute, University of Michigan, Ann Arbor, United States.
Lili Wang
Evgeniy V Petrotchenko
Karl At Makepeace
Scott Horowitz
Jianyi Yang
Yang Zhang
Christoph H Borchers
James Ca Bardwell
University of Michigan–Ann Arbor · USGenome British Columbia · CAHoward Hughes Medical Institute · USUniversity of Victoria · CA

Funding

I-TASSER based atomic-level protein structure predictionR01GM083107 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZHANG, YANG · 2008 to 2019
$3.5M
Atomic-level, large-scale structure prediction of G protein-coupled receptorsR01GM084222 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ZHANG, YANG · 2009 to 2012
$1.3M
NIGMS NIH HHS GM083107NIGMS NIH HHS GM084222NIGMS NIH HHS R01 GM083107NIGMS NIH HHS R01 GM084222
6 · The paper itself

Abstract

Experimental study of the role of disorder in protein function is challenging. It has been proposed that proteins utilize disordered regions in the adaptive recognition of their various binding partners. However apart from a few exceptions, defining the importance of disorder in promiscuous binding interactions has proven to be difficult. In this paper, we have utilized a genetic selection that links protein stability to antibiotic resistance to isolate variants of the newly discovered chaperone Spy that show an up to 7 fold improved chaperone activity against a variety of substrates. These "Super Spy" variants show tighter binding to client proteins and are generally more unstable than is wild type Spy and show increases in apparent flexibility. We establish a good relationship between the degree of their instability and the improvement they show in their chaperone activity. Our results provide evidence for the importance of disorder and flexibility in chaperone function. DOI: http://dx.doi.org/10.7554/eLife.01584.001.

Indexed as

Anti-Bacterial AgentsBinding SitesCross-Linking ReagentsDrug Resistance, BacterialEscherichia coliEscherichia coli ProteinsGenetic VariationGenotypeHydrophobic and Hydrophilic InteractionsMicrobial ViabilityMolecular ChaperonesMolecular Docking SimulationMutationPeriplasmic ProteinsPhenotypeProtein BindingAnti-Bacterial AgentsCross-Linking ReagentsEscherichia coli ProteinsMolecular ChaperonesPeriplasmic ProteinsSpy protein, E colibindingchaperonesintrinsic disorderprotein foldingprotein stability

Identifiers

PMID24497545
PMCPMC3910116
OpenAlexW2034880302

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.