Evidence map›Paper›PMID 24493646›Full record

ArticleGenes & development2014

Loss of Drosophila Ataxin-7, a SAGA subunit, reduces H2B ubiquitination and leads to neural and retinal degeneration.

Ryan D Mohan, George Dialynas, Vikki M Weake, Jianqi Liu, Skylar Martin-Brown, Laurence Florens, Michael P Washburn, Jerry L Workman, Susan M Abmayr

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 60 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. UPS writes a new saga of SAGA.Biochimica et biophysica acta. Gene regulatory mechanisms · 2023
    Review
  9. Review
  10. Progressive degeneration in a newResearch square · 2023
    Article
  11. Review
  12. Article
  13. Review
  14. Review
  15. Review
  16. Article
  17. Article
  18. Article
  19. Review
  20. International journal of molecular sciences · 2020
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Ryan D MohanStowers Institute for Medical Research, Kansas City, Missouri 64110, USA;
George Dialynas
Vikki M Weake
Jianqi Liu
Skylar Martin-Brown
Laurence Florens
Michael P Washburn
Jerry L Workman
Susan M Abmayr
Stowers Institute for Medical Research · USPurdue University West Lafayette · USUniversity of Kansas Medical Center · US

Funding

Analysis of metazoan SAGA complex function in gene expressionR01GM099945 · NIGMS · STOWERS INSTITUTE FOR MEDICAL RESEARCH · PI ABMAYR, SUSAN M, WORKMAN, JERRY L · 2012 to 2015
$1.2M
NIGMS NIH HHS GM99945-01NIGMS NIH HHS R01 GM099945
6 · The paper itself

Abstract

The Spt-Ada-Gcn5-acetyltransferase (SAGA) chromatin-modifying complex possesses acetyltransferase and deubiquitinase activities. Within this modular complex, Ataxin-7 anchors the deubiquitinase activity to the larger complex. Here we identified and characterized Drosophila Ataxin-7 and found that reduction of Ataxin-7 protein results in loss of components from the SAGA complex. In contrast to yeast, where loss of Ataxin-7 inactivates the deubiquitinase and results in increased H2B ubiquitination, loss of Ataxin-7 results in decreased H2B ubiquitination and H3K9 acetylation without affecting other histone marks. Interestingly, the effect on ubiquitination was conserved in human cells, suggesting a novel mechanism regulating histone deubiquitination in higher organisms. Consistent with this mechanism in vivo, we found that a recombinant deubiquitinase module is active in the absence of Ataxin-7 in vitro. When we examined the consequences of reduced Ataxin-7 in vivo, we found that flies exhibited pronounced neural and retinal degeneration, impaired movement, and early lethality.

Indexed as

Amino Acid SequenceAnimalsAtaxin-7Drosophila melanogasterHeLa CellsHistonesHumansLongevityModels, MolecularMolecular Sequence DataMultiprotein ComplexesNerve Tissue ProteinsNeuronsPromoter Regions, GeneticProtein Structure, QuaternaryRetinaAtaxin-7ATXN7 protein, humanHistonesMultiprotein ComplexesNerve Tissue ProteinsUbiquitin-Specific ProteasesH2B ubiquitinationSAGA complexspinocerebellar ataxia

Identifiers

PMID24493646
PMCPMC3923968
OpenAlexW2074912858

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.