Evidence map›Paper›PMID 24492843›Full record

ArticlePLoS biology2014

Drosophila Tempura, a novel protein prenyltransferase α subunit, regulates notch signaling via Rab1 and Rab11.

Wu-Lin Charng, Shinya Yamamoto, Manish Jaiswal, Vafa Bayat, Bo Xiong, Ke Zhang, Hector Sandoval, Gabriela David, Stephen Gibbs, Hsiang-Chih Lu and 3 more

Open access · goldAbstract read
In one paragraph

Article in PLoS biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed, 1 pooled it
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 1 synthesis or guideline pooled it, 55 citations in OpenAlex.

  1. Pooled it
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  13. Frontiers in cell and developmental biology · 2021
    Review
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  18. [Effects of RAB1A on the proliferation, invasion, and metastasis of tongue squamous cell carcinoma cells].Hua xi kou qiang yi xue za zhi = Huaxi kouqiang yixue zazhi = West China journal of stomatology · 2020
    Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Wu-Lin CharngProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Shinya YamamotoProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America ; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America ; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, Texas, United States of America.
Manish JaiswalDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America ; Howard Hughes Medical Institute, Baylor College of Medicine, Houston, Texas, United States of America.
Vafa BayatProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America ; Medical Scientist Training Program, Baylor College of Medicine, Houston, Texas, United States of America.
Bo XiongProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Ke ZhangProgram in Structural and Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, Texas, United States of America.
Hector SandovalDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Gabriela DavidProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Stephen GibbsDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Hsiang-Chih LuProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Kuchuan ChenProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America.
Nikos GiagtzoglouDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America ; Department of Neurology, Baylor College of Medicine, Houston, Texas, United States of America.
Hugo J BellenProgram in Developmental Biology, Baylor College of Medicine, Houston, Texas, United States of America ; Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America ; Jan and Dan Duncan Neurological Research Institute, Texas Children's Hospital, Houston, Texas, United States of America ; Howard Hughes Medical Institute, Baylor College of Medicine, Houston, Texas, United States of America ; Program in Structural and Computational Biology and Molecular Biophysics, Baylor College of Medicine, Houston, Texas, United States of America ; Department of Neuroscience, Baylor College of Medicine, Houston, Texas, United States of America.
Baylor College of Medicine · USHoward Hughes Medical Institute · USTexas Children's Hospital · US

Funding

UNDERSTANDING FXTAS AMONG MALES WITH THE FMR1 PREMUTATIONP30HD024064 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI PAYLOR, RICHARD E · 1988 to 2013
$29.4M
Transposon induced disruption of most Drosophila genesR01GM067858 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2003 to 2020
$15.7M
Research Education and Career Horizons ProgramK12GM084897 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SIFERS, RICHARD NORMAN, SLAUGHTER, GAYLE · 2008 to 2016
$8.3M
Mapping and rescuing EMS-induced lethal mutations on the Drosophila X ChromosomeRC4GM096355 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2010 to 2010
$1.7M
Developmental Biology Training ProgramT32HD055200 · NICHD · BAYLOR COLLEGE OF MEDICINE · PI BELLEN, HUGO J · 2007 to 2011
$1.3M
NICHD NIH HHS 5P30HD024064NICHD NIH HHS 5T32-HD055200NICHD NIH HHS P30 HD024064NICHD NIH HHS T32 HD055200NIGMS NIH HHS 1RC4GM096355-01NIGMS NIH HHS 5K12GM084897NIGMS NIH HHS 5R01GM067858NIGMS NIH HHS K12 GM084897NIGMS NIH HHS R01 GM067858NIGMS NIH HHS RC4 GM096355
6 · The paper itself

Abstract

Vesicular trafficking plays a key role in tuning the activity of Notch signaling. Here, we describe a novel and conserved Rab geranylgeranyltransferase (RabGGT)-α-like subunit that is required for Notch signaling-mediated lateral inhibition and cell fate determination of external sensory organs. This protein is encoded by tempura, and its loss affects the secretion of Scabrous and Delta, two proteins required for proper Notch signaling. We show that Tempura forms a heretofore uncharacterized RabGGT complex that geranylgeranylates Rab1 and Rab11. This geranylgeranylation is required for their proper subcellular localization. A partial dysfunction of Rab1 affects Scabrous and Delta in the secretory pathway. In addition, a partial loss Rab11 affects trafficking of Delta. In summary, Tempura functions as a new geranylgeranyltransferase that regulates the subcellular localization of Rab1 and Rab11, which in turn regulate trafficking of Scabrous and Delta, thereby affecting Notch signaling.

Indexed as

Protein Processing, Post-TranslationalAnimalsDimethylallyltranstransferaseDrosophila melanogasterDrosophila ProteinsGene Expression RegulationGlycoproteinsIntracellular Signaling Peptides and ProteinsMembrane ProteinsProtein PrenylationProtein Subunitsrab11 GTP-Binding Proteinsrab1 GTP-Binding Proteinsrab GTP-Binding ProteinsReceptors, NotchSignal Transductiondelta proteinDimethylallyltranstransferaseDrosophila ProteinsGlycoproteinsIntracellular Signaling Peptides and ProteinsMembrane ProteinsN protein, DrosophilaProtein Subunitsrab11 GTP-Binding ProteinsRab11 protein, Drosophilarab1 GTP-Binding Proteinsrab GTP-Binding ProteinsReceptors, Notchsca protein, Drosophila

Identifiers

PMID24492843
PMCPMC3904817
OpenAlexW2079372652

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.