Evidence map›Paper›PMID 24489826›Full record

ArticlePloS one2014

From ugly duckling to swan: unexpected identification from cell-SELEX of an anti-Annexin A2 aptamer targeting tumors.

Agnes Cibiel, Nam Nguyen Quang, Karine Gombert, Benoit Thézé, Anikitos Garofalakis, Frédéric Ducongé

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Disruption of the Nucleolin-CXCR4 interaction by the DNA aptamer HY-4 halts colorectal cancer metastasis.Molecular therapy : the journal of the American Society of Gene Therapy · 2025
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  19. Applications of aptamers in targeted imaging: state of the art.Current topics in medicinal chemistry · 2015
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Agnes CibielCommissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Direction des Sciences du Vivant (DSV), Intitut d'imagerie Biomédicale (I2 BM) ; Institut National de la Santé et de la Recherche Médicale (INSERM) U1023, Laboratoire d'Imagerie Moléculaire Expérimentale, Orsay, France ; Université Paris Sud, Orsay, France.
Nam Nguyen QuangCommissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Direction des Sciences du Vivant (DSV), Intitut d'imagerie Biomédicale (I2 BM) ; Institut National de la Santé et de la Recherche Médicale (INSERM) U1023, Laboratoire d'Imagerie Moléculaire Expérimentale, Orsay, France ; Université Paris Sud, Orsay, France.
Karine GombertCommissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Direction des Sciences du Vivant (DSV), Intitut d'imagerie Biomédicale (I2 BM) ; Institut National de la Santé et de la Recherche Médicale (INSERM) U1023, Laboratoire d'Imagerie Moléculaire Expérimentale, Orsay, France ; Université Paris Sud, Orsay, France.
Benoit ThézéCommissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Direction des Sciences du Vivant (DSV), Intitut d'imagerie Biomédicale (I2 BM) ; Institut National de la Santé et de la Recherche Médicale (INSERM) U1023, Laboratoire d'Imagerie Moléculaire Expérimentale, Orsay, France ; Université Paris Sud, Orsay, France.
Anikitos GarofalakisCommissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Direction des Sciences du Vivant (DSV), Intitut d'imagerie Biomédicale (I2 BM) ; Institut National de la Santé et de la Recherche Médicale (INSERM) U1023, Laboratoire d'Imagerie Moléculaire Expérimentale, Orsay, France ; Université Paris Sud, Orsay, France.
Frédéric DucongéCommissariat à l'Energie Atomique et aux Energies Alternatives (CEA), Direction des Sciences du Vivant (DSV), Intitut d'imagerie Biomédicale (I2 BM) ; Institut National de la Santé et de la Recherche Médicale (INSERM) U1023, Laboratoire d'Imagerie Moléculaire Expérimentale, Orsay, France ; Université Paris Sud, Orsay, France.
Université Paris-Sud · FRCommissariat à l'Énergie Atomique et aux Énergies Alternatives · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCell-SELEX is now widely used for the selection of aptamers against cell surface biomarkers. However, despite negative selection steps using mock cells, this method sometimes results in aptamers against undesirable targets that are expressed both on mock and targeted cells. Studying these junk aptamers might be useful for further applications than those originally envisaged. METHODOLOGY/PRINCIPAL

findingsCell-SELEX was performed to identify aptamers against CHO-K1 cells expressing human Endothelin type B receptor (ETBR). CHO-K1 cells were used for negative selection of aptamers. Several aptamers were identified but no one could discriminate between both cell lines. We decided to study one of these aptamers, named ACE4, and we identified that it binds to the Annexin A2, a protein overexpressed in many cancers. Radioactive binding assays and flow cytometry demonstrated that the aptamer was able to bind several cancer cell lines from different origins, particularly the MCF-7 cells. Fluorescence microscopy revealed it could be completely internalized in cells in 2 hours. Finally, the tumor targeting of the aptamer was evaluated in vivo in nude mice xenograft with MCF-7 cells using fluorescence diffuse optical tomography (fDOT) imaging. Three hours after intravenous injection, the aptamer demonstrated a significantly higher uptake in the tumor compared to a scramble sequence. CONCLUSIONS/SIGNIFICANCE: Although aptamers could be selected during cell-SELEX against other targets than those initially intended, they represent a potential source of ligands for basic research, diagnoses and therapy. Here, studying such aptamers, we identify one with high affinity for Annexin A2 that could be a promising tool for biomedical application.

Indexed as

Aptamers, NucleotideAdenocarcinomaAnimalsAnnexin A2Breast NeoplasmsCHO CellsCricetulusEndocytosisFemaleFlow CytometryGene ExpressionHumansIncidental FindingsLigandsMCF-7 CellsMiceAnnexin A2ANXA2 protein, humanAptamers, NucleotideLigandsNeoplasm ProteinsReceptor, Endothelin B

Identifiers

PMID24489826
PMCPMC3906106
OpenAlexW2153938133

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.