Evidence map›Paper›PMID 24489712›Full record

ArticlePloS one2014

QTL dissection of Lag phase in wine fermentation reveals a new translocation responsible for Saccharomyces cerevisiae adaptation to sulfite.

Adrien Zimmer, Cécile Durand, Nicolás Loira, Pascal Durrens, David James Sherman, Philippe Marullo

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 61 papers.

0numbers the graph read from it
0cells of the map it votes in
61citing papers in PubMed
14.2field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

61 citing papers in PubMed, 113 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Biocontainment efficacy redefined.Applied and environmental microbiology · 2025
    Article
  8. Colonization of vineyards by non-bioRxiv : the preprint server for biology · 2025
    Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Endo metabolomic profiling ofFrontiers in microbiology · 2023
    Article
  19. Genomic Adaptations ofMicroorganisms · 2022
    Review
  20. Truth in wine yeast.Microbial biotechnology · 2022
    Review

1 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 6 institutions in 2 countries.

Adrien ZimmerLAFFORT, Bordeaux, France ; Univ. Bordeaux, EA Œnologie 4577, ISVV, Villenave d'Ornon, France.
Cécile DurandLAFFORT, Bordeaux, France ; Univ. Bordeaux, EA Œnologie 4577, ISVV, Villenave d'Ornon, France.
Nicolás LoiraCenter for Genome Regulation (FONDAP 15090007), University of Chile, Santiago, Chile.
Pascal DurrensCNRS UMR 5800, Univ. Bordeaux, INRIA project-team Magnome, Talence, France.
David James ShermanCNRS UMR 5800, Univ. Bordeaux, INRIA project-team Magnome, Talence, France.
Philippe MarulloLAFFORT, Bordeaux, France ; Univ. Bordeaux, EA Œnologie 4577, ISVV, Villenave d'Ornon, France.
Institut de Veille Sanitaire · FRInstitut national de recherche en informatique et en automatique · FRObservatoire Aquitain des Sciences de l'Univers · FRUnité de Recherche Œnologie · FRUniversité de Bordeaux · FRUniversity of Chile · CL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Quantitative genetics and QTL mapping are efficient strategies for deciphering the genetic polymorphisms that explain the phenotypic differences of individuals within the same species. Since a decade, this approach has been applied to eukaryotic microbes such as Saccharomyces cerevisiae in order to find natural genetic variations conferring adaptation of individuals to their environment. In this work, a QTL responsible for lag phase duration in the alcoholic fermentation of grape juice was dissected by reciprocal hemizygosity analysis. After invalidating the effect of some candidate genes, a chromosomal translocation affecting the lag phase was brought to light using de novo assembly of parental genomes. This newly described translocation (XV-t-XVI) involves the promoter region of ADH1 and the gene SSU1 and confers an increased expression of the sulfite pump during the first hours of alcoholic fermentation. This translocation constitutes another adaptation route of wine yeast to sulfites in addition to the translocation VIII-t-XVI previously described. A population survey of both translocation forms in a panel of domesticated yeast strains suggests that the translocation XV-t-XVI has been empirically selected by human activity.

Indexed as

FermentationQuantitative Trait LociSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsWineSaccharomyces cerevisiae Proteins

Identifiers

PMID24489712
PMCPMC3904918
OpenAlexW2061123558

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.