Evidence map›Paper›PMID 24487921›Full record

ArticleMammalian genome : official journal of the International Mammalian Genome Society2014

The Collaborative Cross as a resource for modeling human disease: CC011/Unc, a new mouse model for spontaneous colitis.

Allison R Rogala, Andrew P Morgan, Alexis M Christensen, Terry J Gooch, Timothy A Bell, Darla R Miller, Virginia L Godfrey, Fernando Pardo-Manuel de Villena

Open access · hybridAbstract read
In one paragraph

Article in Mammalian genome : official journal of the International Mammalian Genome Society, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
7.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 89 citations in OpenAlex.

  1. Article
  2. A New Mouse Model for Ozone Health Effects Research.Environmental health perspectives · 2026
    Article
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  11. Review
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  13. Article
  14. A Murine Model of Ozone-induced Nonatopic Asthma from the Collaborative Cross.American journal of respiratory cell and molecular biology · 2021
    Article
  15. Article
  16. Evaluation of Pain and Distress and Therapeutic Interventions for Rectal Prolapse in Mice to Reduce Early Study Removal.Journal of the American Association for Laboratory Animal Science : JAALAS · 2021
    Article
  17. Article
  18. Review
  19. Article
  20. Article

2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Allison R RogalaDivision of Laboratory Animal Medicine, University of North Carolina, Chapel Hill, NC, USA.
Andrew P Morgan
Alexis M Christensen
Terry J Gooch
Timothy A Bell
Darla R Miller
Virginia L Godfrey
Fernando Pardo-Manuel de Villena
University of North Carolina at Chapel Hill · US

Funding

Yessinia autotransporters (Yaps): Structure, function, and host responseU54AI057157 · NIAID · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SPARLING, PHILIP FREDERICK · 2003 to 2013
$91.4M
The Burden of Chikungunya and Dengue Infection in KenyaU54AI081680 · NIAID · OREGON HEALTH & SCIENCE UNIVERSITY · PI BEVAN, MICHAEL J · 2009 to 2013
$40.4M
Resource Section - Core 001U42OD010924 · OD · UNIV OF NORTH CAROLINA CHAPEL HILL · PI TERRY R MAGNUSON · 2012 to 2026
$24.5M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008719 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DARVILLE, TONI, DESHMUKH, MOHANISH P · 1999 to 2023
$15.1M
An Interdisciplinary program for systems genomics of complex behaviorsP50MH090338 · NIMH · UNIV OF NORTH CAROLINA CHAPEL HILL · PI PARDO-MANUEL DE VILLENA, FERNANDO · 2009 to 2010
$6.0M
Systems Genetics Resource ConsortiumU01CA134240 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI THREADGILL, DAVID W. · 2007 to 2011
$5.4M
An Interdisciplinary program for systems genomics of complex behaviorsP50HG006582 · NHGRI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI PARDO-MANUEL DE VILLENA, FERNANDO · 2011 to 2013
$2.6M
UNC Predoc Training Progr in Bioinformatics/Comp BiologyT32GM067553 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI ELSTON, TIMOTHY C · 2005 to 2019
$2.5M
NCI NIH HHS U01 CA134240NCI NIH HHS U01CA134240NHGRI NIH HHS P50 HG006582NHGRI NIH HHS P50HG006582NIAID NIH HHS U54 AI057157NIAID NIH HHS U54AI057157NIAID NIH HHS U54 AI081680NIAID NIH HHS U54AI081680NIGMS NIH HHS T32 GM008719NIGMS NIH HHS T32GM008719NIGMS NIH HHS T32 GM067553NIGMS NIH HHS T32GM067553NIH HHS U42 OD010924NIH HHS U42OD010924NIMH NIH HHS P50 MH090338NIMH NIH HHS P50MH090338
6 · The paper itself

Abstract

Inflammatory bowel disease (IBD) is an immune-mediated condition driven by improper responses to intestinal microflora in the context of environmental and genetic background. GWAS in humans have identified many loci associated with IBD, but animal models are valuable for dissecting the underlying molecular mechanisms, characterizing environmental and genetic contributions and developing treatments. Mouse models rely on interventions such as chemical treatment or introduction of an infectious agent to induce disease. Here, we describe a new model for IBD in which the disease develops spontaneously in 20-week-old mice in the absence of known murine pathogens. The model is part of the Collaborative Cross and came to our attention due to a high incidence of rectal prolapse in an incompletely inbred line. Necropsies revealed a profound proliferative colitis with variable degrees of ulceration and vasculitis, splenomegaly and enlarged mesenteric lymph nodes with no discernible anomalies of other organ systems. Phenotypic characterization of the CC011/Unc mice with homozygosity ranging from 94.1 to 99.8% suggested that the trait was fixed and acted recessively in crosses to the colitis-resistant C57BL/6J inbred strain. Using a QTL approach, we identified four loci, Ccc1, Ccc2, Ccc3 and Ccc4 on chromosomes 12, 14, 1 and 8 that collectively explain 27.7% of the phenotypic variation. Surprisingly, we also found that minute levels of residual heterozygosity in CC011/Unc have significant impact on the phenotype. This work demonstrates the utility of the CC as a source of models of human disease that arises through new combinations of alleles at susceptibility loci.

Indexed as

Disease Models, AnimalAnimalsBreedingChromosome MappingCrosses, GeneticDNA PrimersGenotypeHumansInflammatory Bowel DiseasesMiceMice, Inbred C57BLMice, Inbred StrainsPedigreePolymerase Chain ReactionQuantitative Trait LociDNA Primers

Identifiers

PMID24487921
PMCPMC3960486
OpenAlexW2073140713

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.