Evidence map›Paper›PMID 24487280›Full record

ArticleThe Analyst2014

Solid-phase extraction and purification of membrane proteins using a UV-modified PMMA microfluidic bioaffinity μSPE device.

Katrina N Battle, Joshua M Jackson, Małgorzata A Witek, Mateusz L Hupert, Sally A Hunsucker, Paul M Armistead, Steven A Soper

Open access · greenAbstract read
In one paragraph

Article in The Analyst, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 23 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 3 countries.

Katrina N BattleDepartment of Chemistry, Louisiana State University, 232 Choppin Hall, Baton Rouge, LA 70803-1804, USA.
Joshua M Jackson
Małgorzata A Witek
Mateusz L Hupert
Sally A Hunsucker
Paul M Armistead
Steven A Soper
University of North Carolina at Chapel Hill · USBioFluidica (United States) · USCommunities In Schools of Orange County · USLouisiana State University · USUlsan National Institute of Science and Technology · KRUNC Lineberger Comprehensive Cancer Center

Funding

Acute Myeloid Leukemia: MRD Analysis Using Modular uFluidics and uFlow CytometryR21CA173279 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SOPER, STEVEN ALLAN · 2013 to 2015
$757k
NCI NIH HHS R21 CA173279NCI NIH HHS R21CA173279
6 · The paper itself

Abstract

We present a novel microfluidic solid-phase extraction (μSPE) device for the affinity enrichment of biotinylated membrane proteins from whole cell lysates. The device offers features that address challenges currently associated with the extraction and purification of membrane proteins from whole cell lysates, including the ability to release the enriched membrane protein fraction from the extraction surface so that they are available for downstream processing. The extraction bed was fabricated in PMMA using hot embossing and was comprised of 3600 micropillars. Activation of the PMMA micropillars by UV/O3 treatment permitted generation of surface-confined carboxylic acid groups and the covalent attachment of NeutrAvidin onto the μSPE device surfaces, which was used to affinity select biotinylated MCF-7 membrane proteins directly from whole cell lysates. The inclusion of a disulfide linker within the biotin moiety permitted release of the isolated membrane proteins via DTT incubation. Very low levels (∼20 fmol) of membrane proteins could be isolated and recovered with ∼89% efficiency with a bed capacity of 1.7 pmol. Western blotting indicated no traces of cytosolic proteins in the membrane protein fraction as compared to significant contamination using a commercial detergent-based method. We highlight future avenues for enhanced extraction efficiency and increased dynamic range of the μSPE device using computational simulations of different micropillar geometries to guide future device designs.

Indexed as

BiotinylationCell Line, TumorEquipment DesignHumansMembrane ProteinsMicrofluidic Analytical TechniquesPolymethyl MethacrylateSolid Phase ExtractionSolubilityUltraviolet RaysMembrane ProteinsPolymethyl Methacrylate

Identifiers

PMID24487280
PMCPMC3970079
OpenAlexW2067088912

What OpenQuestion holds

Textmetadata
LicenceTDM
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.