Evidence map›Paper›PMID 24486028›Full record

ArticleJournal of biotechnology2014

Analysis of microRNA transcription and post-transcriptional processing by Dicer in the context of CHO cell proliferation.

Matthias Hackl, Vaibhav Jadhav, Gerald Klanert, Michael Karbiener, Marcel Scheideler, Johannes Grillari, Nicole Borth

Abstract read
In one paragraph

Article in Journal of biotechnology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Matthias HacklDepartment of Biotechnology, BOKU - University of Natural Resources and Life Sciences, Vienna, Austria.
Vaibhav JadhavDepartment of Biotechnology, BOKU - University of Natural Resources and Life Sciences, Vienna, Austria.
Gerald KlanertACIB GmbH, Austrian Centre of Industrial Biotechnology, Graz, Austria.
Michael KarbienerRNA Biology Group, Institute for Genomics and Bioinformatics, Graz University of Technology, 8010 Graz, Austria.
Marcel ScheidelerRNA Biology Group, Institute for Genomics and Bioinformatics, Graz University of Technology, 8010 Graz, Austria.
Johannes GrillariDepartment of Biotechnology, BOKU - University of Natural Resources and Life Sciences, Vienna, Austria.
Nicole BorthDepartment of Biotechnology, BOKU - University of Natural Resources and Life Sciences, Vienna, Austria; ACIB GmbH, Austrian Centre of Industrial Biotechnology, Graz, Austria. Electronic address: nicole.borth@boku.ac.at.

Funding

Austrian Science Fund FWF W 1224
6 · The paper itself

Abstract

CHO cells are the mammalian cell line of choice for recombinant production of therapeutic proteins. However, their low rate of proliferation limits obtainable space-time yields due to inefficient biomass accumulation. We set out to correlate microRNA transcription to cell-specific growth-rate by microarray analysis of 5 CHO suspension cell lines with low to high specific growth rates. Global microRNA expression analysis and Pearson correlation studies showed that mature microRNA transcript levels are predominately up-regulated in a state of fast proliferation (46 positively correlated, 17 negatively correlated). To further validate this observation, the expression of three genes that are central to microRNA biogenesis (Dicer, Drosha and Dgcr8) was analyzed. The expression of Dicer, which mediates the final step in microRNA maturation, was found to be strongly correlated to growth rate. Accordingly, knockdown of Dicer impaired cell growth by reducing growth-correlating microRNA transcripts. Moderate ectopic overexpression of Dicer positively affected cell growth, while strong overexpression impaired growth, presumably due to the concomitant increase of microRNAs that inhibit cell growth. Our data therefore suggest that Dicer dependent microRNAs regulate CHO cell proliferation and that Dicer could serve as a potential surrogate marker for cellular proliferation.

Indexed as

RNA Processing, Post-TranscriptionalAnimalsCell ProliferationCHO CellsCricetinaeCricetulusMicroarray AnalysisMicroRNAsRibonuclease IIIMicroRNAsRibonuclease IIICell engineeringChinese hamster ovary cellsDicerMicroarrayMicroRNA

Identifiers

PMID24486028
PMCPMC4247382

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.