Evidence map›Paper›PMID 24482230›Full record

ArticleThe Journal of biological chemistry2014

Structural insights into the interaction between a potent anti-inflammatory protein, viral CC chemokine inhibitor (vCCI), and the human CC chemokine, Eotaxin-1.

Nai-Wei Kuo, Yong-Guang Gao, Megan S Schill, Nancy Isern, Cynthia M Dupureur, Patricia J LiWang

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Structure-guided engineering of tick evasins for targeting chemokines in inflammatory diseases.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  7. Biophysical and Computational Studies of the vCCI:vMIP-II Complex.International journal of molecular sciences · 2017
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Nai-Wei KuoMolecular Cell Biology, University of California, Merced, California 95343.
Yong-Guang GaoInstitute of Biochemistry and Cell Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai 200031, China.
Megan S SchillMolecular Cell Biology, University of California, Merced, California 95343.
Nancy IsernHigh Field NMR Facility, William R. Wiley Environmental Molecular Sciences Laboratory, Richland, Washington 99352.
Cynthia M DupureurDepartment of Chemistry and Biochemistry, University of Missouri, St. Louis, Missouri 63121.
Patricia J LiWangMolecular Cell Biology, University of California, Merced, California 95343. Electronic address: pliwang@ucmerced.edu.
University of California, Merced · USCenter for Excellence in Molecular Cell Science · CNEnvironmental Molecular Sciences Laboratory · USUniversity of Missouri–St. Louis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chemokines play important roles in the immune system, not only recruiting leukocytes to the site of infection and inflammation but also guiding cell homing and cell development. The soluble poxvirus-encoded protein viral CC chemokine inhibitor (vCCI), a CC chemokine inhibitor, can bind to human CC chemokines tightly to impair the host immune defense. This protein has no known homologs in eukaryotes and may represent a potent method to stop inflammation. Previously, our structure of the vCCI·MIP-1β (macrophage inflammatory protein-1β) complex indicated that vCCI uses negatively charged residues in β-sheet II to interact with positively charged residues in the MIP-1β N terminus, 20s region and 40s loop. However, the interactions between vCCI and other CC chemokines have not yet been fully explored. Here, we used NMR and fluorescence anisotropy to study the interaction between vCCI and eotaxin-1 (CCL11), a CC chemokine that is an important factor in the asthma response. NMR results reveal that the binding pattern is very similar to the vCCI·MIP-1β complex and suggest that electrostatic interactions provide a major contribution to binding. Fluorescence anisotropy results on variants of eotaxin-1 further confirm the critical roles of the charged residues in eotaxin-1. In addition, the binding affinity between vCCI and other wild type CC chemokines, MCP-1 (monocyte chemoattractant protein-1), MIP-1β, and RANTES (regulated on activation normal T cell expressed and secreted), were determined as 1.1, 1.2, and 0.22 nm, respectively. To our knowledge, this is the first work quantitatively measuring the binding affinity between vCCI and multiple CC chemokines.

Indexed as

Amino Acid SequenceChemokine CCL11Chemokine CCL2Chemokine CCL4Chemokine CCL5HumansInflammationMolecular Sequence DataNuclear Magnetic Resonance, BiomolecularProtein BindingProtein Structure, SecondaryViral ProteinsVirulence FactorsCCI protein, Cowpox virusCCL11 protein, humanCCL2 protein, humanCCL4 protein, humanChemokine CCL11Chemokine CCL2Chemokine CCL4Chemokine CCL5Viral ProteinsVirulence FactorsAnti-inflammatory ProteinBiophysicsChemokine-binding ProteinChemokinesEotaxinFluorescence AnisotropyMolecular DockingNMRProtein-Protein InteractionsvCCI

Identifiers

PMID24482230
PMCPMC3945322
OpenAlexW2005621760

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.