Evidence map›Paper›PMID 24482191›Full record

ArticleProtoplasma2014

Expression and functional analysis of putative vacuolar Ca2+-transporters (CAXs and ACAs) in roots of salt tolerant and sensitive rice cultivars.

Nana Yamada, Cattarin Theerawitaya, Suriyan Cha-um, Chalermpol Kirdmanee, Teruhiro Takabe

Abstract read
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In one paragraph

Article in Protoplasma, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed.

  1. Evolution and diversification of CaBMC plant biology · 2025
    Article
  2. Comparative Analysis of CaPlants (Basel, Switzerland) · 2024
    Article
  3. Review
  4. Article
  5. The transportome of the endophyteFrontiers in microbiology · 2023
    Article
  6. Article
  7. Review
  8. Review
  9. The Rice Cation/HInternational journal of molecular sciences · 2021
    Article
  10. Review
  11. Review
  12. Article
  13. Review
  14. Characterization and Expression Analysis of the CaPlants (Basel, Switzerland) · 2019
    Article
  15. Article
  16. Review
  17. Article
  18. CaFrontiers in plant science · 2016
    Article
  19. Calcium-Mediated Abiotic Stress Signaling in Roots.Frontiers in plant science · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Nana YamadaPlant Physiology and Biochemistry Laboratory, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Khlong Nueng, Khlong Luang, Pathum Thani, 12120, Thailand.
Cattarin Theerawitaya
Suriyan Cha-um
Chalermpol Kirdmanee
Teruhiro Takabe

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Vacuolar Ca2+-transporters could play an important role for salt tolerance in rice (Oryza sativa L.) root. Here, we compared the expression profiles of putative vacuolar cation/H+ exchanger (CAX) and calmodulin-regulated autoinhibited Ca2+-ATPase (ACA) in rice roots of salt tolerant cv. Pokkali and salt sensitive cv. IR29. In addition to five putative vacuolar CAX genes in the rice genome, a new CAX gene (OsCAX4) has been annotated. In the present study, we isolated the OsCAX4 gene and showed that its encoded protein possesses a unique transmembrane structure and is potentially involved in transporting not only Ca2+ but also Mn2+ and Cu2+. These six OsCAX genes differed in their mRNA expression pattern in roots of tolerant versus sensitive rice cultivars exposed to salt stress. For example, OsCAX4 showed abundant expression in IR29 (sensitive) upon prolonged salt stress. The mRNA expression profile of four putative vacuolar Ca2+-ATPases (OsACA4-7) was also examined. Under control conditions, the mRNA levels of OsACA4, OsACA5, and OsACA7 were relatively high and similar among IR29 and Pokkali. Upon salt stress, only OsACA4 showed first a decrease in its expression in Pokkali (tolerant), followed by a significant increase. Based on these results, a role of vacuolar Ca2+ transporter for salt tolerance in rice root was discussed.

Indexed as

Amino Acid SequenceAntiportersBase SequenceBiological TransportCalciumCalcium-Transporting ATPasesCation Transport ProteinsCloning, MolecularCopperGene Expression Regulation, PlantMagnesiumMolecular Sequence DataOryzaPlant RootsRNA, MessengerSalt-Tolerant PlantsAntiportersCalciumcalcium-hydrogen antiportersCalcium-Transporting ATPasesCation Transport ProteinsCopperMagnesiumRNA, MessengerSodium Chloride

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.