Evidence map›Paper›PMID 24480825›Full record

ArticleJournal of the American Society of Nephrology : JASN2014

Tet3-mediated hydroxymethylation of epigenetically silenced genes contributes to bone morphogenic protein 7-induced reversal of kidney fibrosis.

Björn Tampe, Desiree Tampe, Claudia A Müller, Hikaru Sugimoto, Valerie LeBleu, Xingbo Xu, Gerhard A Müller, Elisabeth M Zeisberg, Raghu Kalluri, Michael Zeisberg

Open access · bronzeAbstract read
In one paragraph

Article in Journal of the American Society of Nephrology : JASN, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 78 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
78citing papers in PubMed, 1 pooled it
7.5field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

78 citing papers in PubMed, 1 synthesis or guideline pooled it, 142 citations in OpenAlex.

  1. Pooled it
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  16. Metabolic memory: mechanisms and diseases.Signal transduction and targeted therapy · 2024
    Review
  17. Pathomechanisms of Diabetic Kidney Disease.Journal of clinical medicine · 2023
    Review
  18. Epigenetics as a versatile regulator of fibrosis.Journal of translational medicine · 2023
    Review
  19. Article
  20. Article

18 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Björn TampeDepartments of Nephrology and Rheumatology, and.
Desiree TampeDepartments of Nephrology and Rheumatology, and.
Claudia A MüllerDepartments of Nephrology and Rheumatology, and Department of Transplantation, Immunology and Immunohematology, Tübingen University Medical Center, Eberhard Karls University, Tübingen, Germany;
Hikaru SugimotoDepartment of Cancer Biology and the Metastasis Research Center, University of Texas MD Anderson Cancer Center, Houston, Texas; and.
Valerie LeBleuDepartment of Cancer Biology and the Metastasis Research Center, University of Texas MD Anderson Cancer Center, Houston, Texas; and.
Xingbo XuCardiology and Pneumology, Göttingen University Medical Center, Georg August University, Göttingen, Germany; German Center for Cardiovascular Research (DZHK), Göttingen, Germany.
Gerhard A MüllerDepartments of Nephrology and Rheumatology, and.
Elisabeth M ZeisbergCardiology and Pneumology, Göttingen University Medical Center, Georg August University, Göttingen, Germany; German Center for Cardiovascular Research (DZHK), Göttingen, Germany.
Raghu KalluriDepartment of Cancer Biology and the Metastasis Research Center, University of Texas MD Anderson Cancer Center, Houston, Texas; and rkalluri@mdanderson.org mzeisberg@med.uni-goettingen.de.
Michael ZeisbergDepartments of Nephrology and Rheumatology, and rkalluri@mdanderson.org mzeisberg@med.uni-goettingen.de.
Center for Rheumatology · USUniversity of Göttingen · DEThe University of Texas MD Anderson Cancer Center · USGerman Centre for Cardiovascular Research · DE

Funding

Tumor Evolution and Metastasis ProgramP30CA016672 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI Scott Kopetz · 1985 to 2026
$290.8M
University of Michigan O'Brien Kidney Translational Core CenterP30DK081943 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PENNATHUR, SUBRAMANIAM · 2008 to 2022
$12.9M
TYPE IV COLLAGEN IN ALPORT SYNDROME PATHOGENESISR01DK055001 · NIDDK · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KALLURI, RAGHU · 1999 to 2014
$4.3M
Role of Fibroblasts, Myeloid Cells and Matrix in PDACU01CA151925 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KALLURI, RAGHU, MOSES, HAROLD L · 2010 to 2014
$3.2M
Epigenetic Modifications in Renal FibrogenesisR01DK081576 · NIDDK · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KALLURI, RAGHU · 2009 to 2013
$1.8M
Targeting Pericytes in CancerR01CA155370 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI KALLURI, RAGHU · 2011 to 2015
$1.7M
Role of Fibroblasts in CancerR01CA125550 · NCI · BETH ISRAEL DEACONESS MEDICAL CENTER · PI KALLURI, RAGHU · 2008 to 2010
$1.1M
NCI NIH HHS CA 125550NCI NIH HHS CA 151925NCI NIH HHS CA 155370NCI NIH HHS P30 CA016672NCI NIH HHS P30 CA16672NCI NIH HHS R01 CA125550NCI NIH HHS R01 CA155370NCI NIH HHS U01 CA151925NIDDK NIH HHS DK 081576NIDDK NIH HHS DK 55001NIDDK NIH HHS P30 DK081943NIDDK NIH HHS R01 DK055001NIDDK NIH HHS R01 DK081576
6 · The paper itself

Abstract

Methylation of CpG island promoters is an epigenetic event that can effectively silence transcription over multiple cell generations. Hypermethylation of the Rasal1 promoter contributes to activation of fibroblasts and progression of kidney fibrosis. Here, we explored whether such causative hypermethylation could be reversed through endogenous mechanisms and whether such reversal of hypermethylation is a constituent of the antifibrotic activity of bone morphogenic protein 7 (BMP7). We show that successful inhibition of experimental kidney fibrosis through administration of BMP7 associates with normalization of Rasal1 promoter hypermethylation. Furthermore, this reversal of pathologic hypermethylation was achieved specifically through Tet3-mediated hydroxymethylation. Collectively, our findings reveal a new mechanism that may be exploited to facilitate therapeutic DNA demethylation to reverse kidney fibrosis.

Indexed as

Gene SilencingAnimalsBiomarkersBone Morphogenetic Protein 7Cells, CulturedDioxygenasesDNA-Binding ProteinsDNA MethylationEpigenesis, GeneticGTPase-Activating ProteinsMiceNephrosclerosisPromoter Regions, GeneticProto-Oncogene ProteinsUreteral ObstructionBiomarkersbmp7 protein, mouseBone Morphogenetic Protein 7DioxygenasesDNA-Binding ProteinsGTPase-Activating ProteinsProto-Oncogene ProteinsRASAL1 protein, mouseTet3 protein, mouse

Identifiers

PMID24480825
PMCPMC4005308
OpenAlexW2156615378

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.