Evidence map›Paper›PMID 24475327›Full record

ArticleIranian journal of microbiology2013

Serotyping of Streptococcus pneumoniae isolated from Tehran by Multiplex PCR: Are serotypes of clinical and carrier isolates identical?

Seyed Fazlollah Mousavi, Saman Nobari, Fatemeh Rahmati Ghezelgeh, Hamid Lyriai, Pantea Jalali, Fereshteh Shahcheraghi, Mahvash Oskoui

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Article in Iranian journal of microbiology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 14 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Serotype distribution of Streptococcus pneumoniae among healthy carriers and clinical patients: a systematic review from Iran.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2020
    Pooled it
  3. A MultinuclearACS omega · 2026
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  10. Molecular Detection and Serotyping ofIranian journal of medical sciences · 2020
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Seyed Fazlollah MousaviDepartment of Bacteriology & Microbiology Research Center, Pasteur Institute of Iran, Tehran, Iran.
Saman NobariDepartment of Bacteriology & Microbiology Research Center, Pasteur Institute of Iran, Tehran, Iran.
Fatemeh Rahmati GhezelgehDepartment of Bacteriology & Microbiology Research Center, Pasteur Institute of Iran, Tehran, Iran.
Hamid LyriaiDepartment of Bacteriology & Microbiology Research Center, Pasteur Institute of Iran, Tehran, Iran.
Pantea JalaliDepartment of Bacteriology & Microbiology Research Center, Pasteur Institute of Iran, Tehran, Iran.
Fereshteh ShahcheraghiDepartment of Bacteriology & Microbiology Research Center, Pasteur Institute of Iran, Tehran, Iran.
Mahvash OskouiDepartment of Bacteriology & Microbiology Research Center, Pasteur Institute of Iran, Tehran, Iran.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND AND

objectivesStreptococcus pneumoniae is the most common cause of invasive infections among both young children and elderly people. Common serotypes causing invasive diseases and the emergence of carriers of Streptococcus pneumoniae in Iran is not yet known. Past-vaccine surveillance studies of serotype prevalence patterns in Iran are necessary to monitor the epidemiology of Streptococcus pneumoniae. Because of variation of pneumococcal serotypes in different geographical regions, in this study we evaluated common serotypes causing pneumococcal infections and healthy carrier children in Tehran by Multiplex PCR. MATERIALS AND

methodsA total of 150 nasopharyngeal swabs were collected from healthy children in Tehran between December 2011 and August a2012, and 100 clinical samples were collected. Identification was performed by biochemical and molecular tests. Serotyping was done by multiplex PCR. We designed primers based on the sequences available for the routine capsular types and combined them into six multiplex PCR.

resultsFrom 150 nasopharyngeal swabs, 40 isolates of Streptococcus pneumoniae were identified after identification tests. Thirty six clinical isolates were also detected among clinical samples. Four serotypes (19A, 6, 3, 23F) of S. pneumoniae accounted for 55.7% of both sets of strains isolated from nasal carriage and clinical samples. Serotype 19A was the most common serotype among both groups.

conclusionThe multiplex PCR approach was successfully adapted to identify serotypes from more than 91% of the isolates tested. Among S. pneumoniae isolates in Tehran, the most prevalent serotypes were similar among carriage and invasive isolates. Continued monitoring of common serotypes of Streptococcus pneumoniae is essential for future vaccine formulation in Iran.

Indexed as

Multiplex PCRSerotypingStreptococcus pneumoniae

Identifiers

PMID24475327
PMCPMC3895558

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.