ArticlePloS one2014
Pseudomonas putida CSV86: a candidate genome for genetic bioaugmentation.
Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed, 56 citations in OpenAlex.
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- New insights and advances on pyomelanin production: from microbial synthesis to applications.Journal of industrial microbiology & biotechnology · 2022Review
- Managing gene expression in Pseudomonas simiae EGD-AQ6 for chloroaromatic compound degradation.Archives of microbiology · 2022Article
- Life Within a Contaminated Niche: Comparative Genomic Analyses of an Integrative Conjugative Element ICEFrontiers in microbiology · 2022Article
- Genomic characterization of a polyvalent hydrocarbonoclastic bacterium Pseudomonas sp. strain BUN14.Scientific reports · 2021Article
- Mapping Microbial Capacities for Bioremediation: Genes to Genomics.Indian journal of microbiology · 2020Review
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- Ultrafast photoactivation of C─H bonds inside water-soluble nanocages.Science advances · 2019Article
- The genome of Alcaligenes aquatilis strain BU33N: Insights into hydrocarbon degradation capacity.PloS one · 2019Article
- An Approach to In Silico Dissection of Bacterial Intelligence Through Selective Genomic Tools.Indian journal of microbiology · 2018Article
- Transcriptional Modulation of Transport- and Metabolism-Associated Gene Clusters Leading to Utilization of Benzoate in Preference to Glucose in Pseudomonas putida CSV86.Applied and environmental microbiology · 2017Article
- Effects of the Inoculant Strain Pseudomonas sp. SPN31 nahCurrent microbiology · 2017Article
- Carbon Source-Dependent Inducible Metabolism of Veratryl Alcohol and Ferulic Acid in Pseudomonas putida CSV86.Applied and environmental microbiology · 2017Article
- High Resolution Structures of Periplasmic Glucose-binding Protein of Pseudomonas putida CSV86 Reveal Structural Basis of Its Substrate Specificity.The Journal of biological chemistry · 2016Article
Corrections and comments
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Authors and funding
5 authors at 3 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Pseudomonas putida CSV86, a plasmid-free strain possessing capability to transfer the naphthalene degradation property, has been explored for its metabolic diversity through genome sequencing. The analysis of draft genome sequence of CSV86 (6.4 Mb) revealed the presence of genes involved in the degradation of naphthalene, salicylate, benzoate, benzylalcohol, p-hydroxybenzoate, phenylacetate and p-hydroxyphenylacetate on the chromosome thus ensuring the stability of the catabolic potential. Moreover, genes involved in the metabolism of phenylpropanoid and homogentisate, as well as heavy metal resistance, were additionally identified. Ability to grow on vanillin, veratraldehyde and ferulic acid, detection of inducible homogentisate dioxygenase and growth on aromatic compounds in the presence of heavy metals like copper, cadmium, cobalt and arsenic confirm in silico observations reflecting the metabolic versatility. In silico analysis revealed the arrangement of genes in the order: tRNA(Gly), integrase followed by nah operon, supporting earlier hypothesis of existence of a genomic island (GI) for naphthalene degradation. Deciphering the genomic architecture of CSV86 for aromatic degradation pathways and identification of elements responsible for horizontal gene transfer (HGT) suggests that genetic bioaugmentation strategies could be planned using CSV86 for effective bioremediation.
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