Evidence map›Paper›PMID 24471499›Full record

ArticleJournal of proteome research2014

Quantitative glycoproteomics analysis reveals changes in N-glycosylation level associated with pancreatic ductal adenocarcinoma.

Sheng Pan, Ru Chen, Yasuko Tamura, David A Crispin, Lisa A Lai, Damon H May, Martin W McIntosh, David R Goodlett, Teresa A Brentnall

Open access · bronzeAbstract read
In one paragraph

Article in Journal of proteome research, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 105 citations in OpenAlex.

  1. Trial
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  10. Primordial Cells Bridging the Gap Between Innate and Adaptive Immunity.Advances in experimental medicine and biology · 2025
    Review
  11. Article
  12. Review
  13. Mass spectrometry analysis of intact proteinJournal of Zhejiang University. Science. B · 2024
    Article
  14. Review
  15. Review
  16. The Role of Clinical Glyco(proteo)mics in Precision Medicine.Molecular & cellular proteomics : MCP · 2023
    Article
  17. Review
  18. Review
  19. Review
  20. Review

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Sheng PanThe Division of Gastroenterology, Department of Medicine, University of Washington , 1959 North East Pacific Street, Seattle, Washington 98195, United States.
Ru Chen
Yasuko Tamura
David A Crispin
Lisa A Lai
Damon H May
Martin W McIntosh
David R Goodlett
Teresa A Brentnall
University of Washington · USCape Town HVTN Immunology Laboratory / Hutchinson Centre Research Institute of South Africa · ZANorth Seattle College · USUniversity of Maryland, College Park · US

Funding

Clonally Expanded Mutations Identify Cancer Precursors in Chronic InflammationR01CA160674 · NCI · UNIVERSITY OF WASHINGTON · PI BRENTNALL, TERESA A, LOEB, LAWRENCE A · 2012 to 2016
$2.8M
Pancreatic Cancer Protein Biomarkers for Early DetectionR01CA107209 · NCI · UNIVERSITY OF WASHINGTON · PI BRENTNALL, TERESA A · 2006 to 2010
$2.5M
Protein biomarkers for detection of pancreatic cancerK07CA116296 · NCI · UNIVERSITY OF WASHINGTON · PI CHEN, RU · 2007 to 2011
$650k
Quantitative glycoproteomics for pancreatic cancer studiesK25CA137222 · NCI · UNIVERSITY OF WASHINGTON · PI PAN, SHENG · 2010 to 2014
$612k
Aberrant Glycosylation Signature in Pancreatic CancerR21CA149772 · NCI · UNIVERSITY OF WASHINGTON · PI BRENTNALL, TERESA A, PAN, SHENG · 2011 to 2012
$396k
Pancreatic Juice Biomarker for Pancreatic CancerR21CA161575 · NCI · UNIVERSITY OF WASHINGTON · PI CHEN, RU · 2011 to 2012
$388k
NCI NIH HHS K07 CA116296NCI NIH HHS K07CA116296NCI NIH HHS K25 CA137222NCI NIH HHS K25CA137222NCI NIH HHS R01 CA107209NCI NIH HHS R01CA10720 9NCI NIH HHS R01 CA160674NCI NIH HHS R21 CA149772NCI NIH HHS R21CA14977 2NCI NIH HHS R21 CA161575NCI NIH HHS R21CA161575NCRR NIH HHS 1S10RR-449017262
6 · The paper itself

Abstract

Glycosylation plays an important role in epithelial cancers, including pancreatic ductal adenocarcinoma. However, little is known about the glycoproteome of the human pancreas or its alterations associated with pancreatic tumorigenesis. Using quantitative glycoproteomics approach, we investigated protein N-glycosylation in pancreatic tumor tissue in comparison with normal pancreas and chronic pancreatitis tissue. The study lead to the discovery of a roster of glycoproteins with aberrant N-glycosylation level associated with pancreatic cancer, including mucin-5AC (MUC5AC), carcinoembryonic antigen-related cell adhesion molecule 5 (CEACAM5), insulin-like growth factor binding protein (IGFBP3), and galectin-3-binding protein (LGALS3BP). Pathway analysis of cancer-associated aberrant glycoproteins revealed an emerging phenomenon that increased activity of N-glycosylation was implicated in several pancreatic cancer pathways, including TGF-β, TNF, NF-kappa-B, and TFEB-related lysosomal changes. In addition, the study provided evidence that specific N-glycosylation sites within certain individual proteins can have significantly altered glycosylation occupancy in pancreatic cancer, reflecting the complexity of the molecular mechanisms underlying cancer-associated glycosylation events.

Indexed as

Gene Expression Regulation, NeoplasticAmino Acid SequenceAntigens, NeoplasmBiomarkers, TumorCarcinoembryonic AntigenCarcinoma, Pancreatic DuctalCarrier ProteinsCase-Control StudiesChronic DiseaseExtracellular Matrix ProteinsGlycoproteinsGlycosylationGPI-Linked ProteinsHumansInsulin-Like Growth Factor Binding Protein 3Molecular Sequence DataAntigens, NeoplasmBiomarkers, TumorCarcinoembryonic AntigenCarrier ProteinsCEACAM5 protein, humanExtracellular Matrix ProteinsGlycoproteinsGPI-Linked ProteinsIGFBP3 protein, humanInsulin-Like Growth Factor Binding Protein 3LGALS3BP protein, humanMUC5AC protein, humanMucin 5ACNeoplasm Proteins

Identifiers

PMID24471499
PMCPMC3993895
OpenAlexW2023139178

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.