Evidence map›Paper›PMID 24468675›Full record

ArticleJournal of inorganic biochemistry2014

A facile and versatile methodology for cysteine specific labeling of proteins with octahedral polypyridyl d⁶ metal complexes.

Sudharsan Dwaraknath, Ngoc-Han Tran, Thanh Dao, Alexander Colbert, Sarah Mullen, Angelina Nguyen, Alejandro Cortez, Lionel Cheruzel

Abstract read
In one paragraph

Article in Journal of inorganic biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Review
  3. Article
  4. Review
  5. A photoactive semisynthetic metalloenzyme exhibits complete selectivity for COChemical communications (Cambridge, England) · 2018
    Article
  6. Keeping the spotlight on cytochrome P450.Biochimica et biophysica acta. Proteins and proteomics · 2018
    Review
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Sudharsan DwaraknathSan José State University, Department of Chemistry, One Washington Square, San José, CA 95192-0101, United States.
Ngoc-Han TranSan José State University, Department of Chemistry, One Washington Square, San José, CA 95192-0101, United States.
Thanh DaoSan José State University, Department of Chemistry, One Washington Square, San José, CA 95192-0101, United States.
Alexander ColbertSan José State University, Department of Chemistry, One Washington Square, San José, CA 95192-0101, United States.
Sarah MullenSan José State University, Department of Chemistry, One Washington Square, San José, CA 95192-0101, United States.
Angelina NguyenSan José State University, Department of Chemistry, One Washington Square, San José, CA 95192-0101, United States.
Alejandro CortezSan José State University, Department of Chemistry, One Washington Square, San José, CA 95192-0101, United States.
Lionel CheruzelSan José State University, Department of Chemistry, One Washington Square, San José, CA 95192-0101, United States. Electronic address: lionel.cheruzel@sjsu.edu.

Funding

Ru(II)-diimine labeled P450 mutants for the selective hydroxylation of substrateSC3GM095415 · NIGMS · SAN JOSE STATE UNIVERSITY · PI CHERUZEL, LIONEL E. · 2011 to 2018
$860k
NIGMS NIH HHS GM095415NIGMS NIH HHS SC3 GM095415
6 · The paper itself

Abstract

We have synthesized and characterized four octahedral polypyridyl d(6) metal complexes bearing the 5,6-epoxy-5,6-dihydro-[1,10]phenanthroline ligand (L1) as cysteine specific labeling reagents. The proposed synthetic pathways allow the preparation of the metal complexes containing Re(I), Ru(II), Os(II) and Ir(III) while preserving the epoxide functionality. The complexes were characterized by (1)H and (13)C NMR, mass spectrometry, UV-visible and luminescence spectroscopies as well as cyclic voltammetry. As proof of concept, a set of non-native single cysteine P450 BM3 heme domain mutants previously developed in our laboratory was used to study the labeling reaction. We demonstrate that the proposed labels can selectively react, often in high yield, with cysteine residues of the protein via the nucleophilic thiol ring opening of the epoxide moiety. In addition, under basic conditions, subsequent loss of a water molecule led to the aromatization of the phenanthroline ring on the protein-bound label compounds, as observed by mass spectrometry and luminescence measurements.

Indexed as

Bacterial ProteinsCoordination ComplexesCysteineCytochrome P-450 Enzyme SystemIndicators and ReagentsIridiumNADPH-Ferrihemoprotein ReductaseOsmiumPyridinesRheniumRutheniumBacterial ProteinsCoordination ComplexesCysteineCytochrome P-450 Enzyme Systemflavocytochrome P450 BM3 monoxygenasesIndicators and ReagentsIridiumNADPH-Ferrihemoprotein ReductaseOsmiumPyridinesRheniumRuthenium5,6-Epoxy-5,6-dihydro-[1,10]phenanthrolineBiomolecule labelingPolypyridyl d(6) metal complexesSulfhydryl specific

Identifiers

PMID24468675
PMCPMC4058400

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.