Evidence map›Paper›PMID 24465984›Full record

ArticlePloS one2014

Atrial Fibrillation associated chromosome 4q25 variants are not associated with PITX2c expression in human adult left atrial appendages.

Shamone R Gore-Panter, Jeffery Hsu, Peter Hanna, A Marc Gillinov, Gosta Pettersson, David W Newton, Christine S Moravec, David R Van Wagoner, Mina K Chung, John Barnard and 1 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 60 citations in OpenAlex.

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  5. Single-Nucleotide Polymorphisms,International journal of molecular sciences · 2025
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  6. CommonCirculation. Genomic and precision medicine · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Shamone R Gore-PanterDepartment of Cellular and Molecular Medicine, Cleveland Clinic, Cleveland, Ohio, United States of America ; Department of Molecular Medicine, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, Ohio, United States of America.
Jeffery HsuDepartment of Cellular and Molecular Medicine, Cleveland Clinic, Cleveland, Ohio, United States of America ; Department of Molecular Medicine, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, Ohio, United States of America.
Peter HannaCleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, Ohio, United States of America.
A Marc GillinovDepartment of Thoracic and Cardiovascular Surgery, Cleveland Clinic, Cleveland, Ohio, United States of America.
Gosta PetterssonDepartment of Thoracic and Cardiovascular Surgery, Cleveland Clinic, Cleveland, Ohio, United States of America.
David W NewtonDepartment of Cardiovascular Medicine, Cleveland Clinic, Cleveland, Ohio, United States of America.
Christine S MoravecDepartment of Molecular Cardiology, Cleveland Clinic, Cleveland, Ohio, United States of America ; Department of Cardiovascular Medicine, Cleveland Clinic, Cleveland, Ohio, United States of America.
David R Van WagonerDepartment of Molecular Cardiology, Cleveland Clinic, Cleveland, Ohio, United States of America ; Department of Cardiovascular Medicine, Cleveland Clinic, Cleveland, Ohio, United States of America.
Mina K ChungDepartment of Molecular Cardiology, Cleveland Clinic, Cleveland, Ohio, United States of America ; Department of Cardiovascular Medicine, Cleveland Clinic, Cleveland, Ohio, United States of America.
John BarnardDepartment of Quantitative Health Sciences, Cleveland Clinic, Cleveland, Ohio, United States of America.
Jonathan D SmithDepartment of Cellular and Molecular Medicine, Cleveland Clinic, Cleveland, Ohio, United States of America ; Department of Molecular Medicine, Cleveland Clinic Lerner College of Medicine of Case Western Reserve University, Cleveland, Ohio, United States of America ; Department of Molecular Cardiology, Cleveland Clinic, Cleveland, Ohio, United States of America.
Cleveland Clinic · USCase Western Reserve University · US

Funding

Functional Genomics of Atrial Fibrillation in Human AtriaR01HL111314 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI BARNARD, JOHN, CHUNG, MINA KAY · 2012 to 2019
$6.1M
Genetics of Atrial FibrillationR01HL090620 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI BARNARD, JOHN, CHUNG, MINA KAY · 2008 to 2012
$2.9M
Molecular Medicine Training ProgramT32GM088088 · NIGMS · CLEVELAND CLINIC LERNER COM-CWRU · PI SMITH, JONATHAN D · 2011 to 2020
$1.7M
Genetic Studies of Loci Associated with Atrial FibrillationF31HL103088 · NHLBI · CLEVELAND CLINIC LERNER COM-CWRU · PI GORE PANTER, SHAMONE ROBINETTE · 2011 to 2013
$86k
NHLBI NIH HHS F31 HL103088NHLBI NIH HHS R01 HL090620NHLBI NIH HHS R01 HL111314NIGMS NIH HHS T32 GM088088
6 · The paper itself

Abstract

Atrial Fibrillation (AF), the most common sustained arrhythmia, has a strong genetic component, but the mechanism by which common genetic variants lead to increased AF susceptibility is unknown. Genome-wide association studies (GWAS) have identified that the single nucleotide polymorphisms (SNPs) most strongly associated with AF are located on chromosome 4q25 in an intergenic region distal to the PITX2 gene. Our objective was to determine whether the AF-associated SNPs on chromosome 4q25 were associated with PITX2c expression in adult human left atrial appendages. Analysis of a lone AF GWAS identified four independent AF risk SNPs at chromosome 4q25. Human adult left atrial appendage tissue was obtained from 239 subjects of European Ancestry and used for SNP analysis of genomic DNA and determination of PITX2c RNA expression levels by quantitative PCR. Subjects were divided into three groups based on their history of AF and pre-operative rhythm. AF rhythm subjects had higher PITX2c expression than those with history of AF but in sinus rhythm. PITX2c expression was not associated with the AF risk SNPs in human adult left atrial appendages in all subjects combined or in each of the three subgroups. However, we identified seven SNPs modestly associated with PITX2c expression located in the introns of the ENPEP gene, ∼54 kb proximal to PITX2. PITX2c expression in human adult left atrial appendages is not associated with the chromosome 4q25 AF risk SNPs; thus, the mechanism by which these SNPs are associated with AF remains enigmatic.

Indexed as

Chromosomes, Human, Pair 4Gene ExpressionGenetic VariationAdultAgedAtrial AppendageAtrial FibrillationFemaleGenetic Predisposition to DiseaseGenome-Wide Association StudyHomeobox Protein PITX2Homeodomain ProteinsHumansMaleMiddle AgedPolymorphism, Single NucleotideHomeobox Protein PITX2Homeodomain ProteinsSHOX2 protein, humanTranscription Factors

Identifiers

PMID24465984
PMCPMC3899225
OpenAlexW2087302429

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.