Evidence map›Paper›PMID 24465846›Full record

ArticlePloS one2014

Microarray analysis of rat pancreas reveals altered expression of Alox15 and regenerating islet-derived genes in response to iron deficiency and overload.

Richard Coffey, Hyeyoung Nam, Mitchell D Knutson

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Reg3 Proteins as Gut Hormones?Endocrinology · 2019
    Review
  5. Ankaferd Influences mRNA Expression of Iron-Regulated Genes During Iron-Deficiency Anemia.Clinical and applied thrombosis/hemostasis : official journal of the International Academy of Clinical and Applied Thrombosis/Hemostasis · 2018
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Richard CoffeyFood Science and Human Nutrition Department, University of Florida, Gainesville, Florida, United States of America.
Hyeyoung NamFood Science and Human Nutrition Department, University of Florida, Gainesville, Florida, United States of America.
Mitchell D KnutsonFood Science and Human Nutrition Department, University of Florida, Gainesville, Florida, United States of America.
University of Florida · US

Funding

ZIP Proteins and Iron MetabolismR01DK080706 · NIDDK · UNIVERSITY OF FLORIDA · PI KNUTSON, MITCHELL D · 2008 to 2022
$4.7M
NIDDK NIH HHS R01 DK-080706NIDDK NIH HHS R01 DK080706
6 · The paper itself

Abstract

It is well known that iron overload can result in pancreatic iron deposition, beta-cell destruction, and diabetes in humans. Recent studies in animals have extended the link between iron status and pancreatic function by showing that iron depletion confers protection against beta-cell dysfunction and diabetes. The aim of the present study was to identify genes in the pancreas that are differentially expressed in response to iron deficiency or overload. Weanling male Sprague-Dawley rats (n = 6/group) were fed iron-deficient, iron-adequate, or iron-overloaded diets for 3 weeks to alter their iron status. Total RNA was isolated from the pancreases and pooled within each group for microarray analyses in which gene expression levels were compared to those in iron-adequate controls. In iron-deficient pancreas, a total of 66 genes were found to be differentially regulated (10 up, 56 down), whereas in iron-overloaded pancreas, 164 genes were affected (82 up, 82 down). The most up-regulated transcript in iron-deficient pancreas was arachidonate 15-lipoxygenase (Alox15), which has been implicated in the development of diabetes. In iron-overloaded pancreas, the most upregulated transcripts were Reg1a, Reg3a, and Reg3b belonging to the regenerating islet-derived gene (Reg) family. Reg expression has been observed in response to pancreatic stress and is thought to facilitate pancreatic regeneration. Subsequent qRT-PCR validation indicated that Alox15 mRNA levels were 4 times higher in iron-deficient than in iron-adequate pancreas and that Reg1a, Reg3a, and Reg3b mRNA levels were 17-36 times higher in iron-overloaded pancreas. The elevated Alox15 mRNA levels in iron-deficient pancreas were associated with 8-fold higher levels of Alox15 protein as indicated by Western blotting. Overall, these data raise the possibility that Reg expression may serve as a biomarker for iron-related pancreatic stress, and that iron deficiency may adversely affect the risk of developing diabetes through up-regulation of Alox15.

Indexed as

Gene Expression RegulationIron DeficienciesOligonucleotide Array Sequence AnalysisAnimalsAntigens, NeoplasmArachidonate 15-LipoxygenaseBiomarkers, TumorBlood GlucoseBlotting, WesternBody WeightDown-RegulationGene Expression ProfilingIron OverloadIslets of LangerhansLectins, C-TypeMaleAntigens, NeoplasmArachidonate 15-LipoxygenaseBiomarkers, TumorBlood GlucoseLectins, C-TypeMineralsPancreatitis-Associated ProteinsREG3A protein, humanReg3a protein, ratRNA, Messenger

Identifiers

PMID24465846
PMCPMC3897611
OpenAlexW2059690739

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.