Evidence map›Paper›PMID 24465692›Full record

ArticlePloS one2014

Identification of differentially expressed proteins in porcine alveolar macrophages infected with virulent/attenuated strains of porcine reproductive and respiratory syndrome virus.

Yan-Jun Zhou, Jian-Ping Zhu, Tao Zhou, Qun Cheng, Ling-Xue Yu, Ya-Xin Wang, Shen Yang, Yi-Feng Jiang, Wu Tong, Fei Gao and 3 more

Abstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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  3. Review
  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yan-Jun ZhouDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Jian-Ping ZhuDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Tao ZhouDepartment of Microbiology and Molecular Genetics, Michigan State University, East Lansing, Michigan, United States of America.
Qun ChengDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Ling-Xue YuDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Ya-Xin WangDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Shen YangDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Yi-Feng JiangDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Wu TongDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Fei GaoDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Hai YuDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Guo-Xin LiDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.
Guang-Zhi TongDivision of Swine Infectious Diseases, Shanghai Veterinary Research Institute, CAAS, Shanghai, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The highly pathogenic porcine reproductive and respiratory syndrome virus (HP-PRRSV) is still a serious threat to the swine industry. However, the pathogenic mechanism of HP-PRRSV remains unclear. We infected host porcine alveolar macrophages (PAMs) with the virulent HuN4 strain and the attenuated HuN4-F112 strain and then utilized fluorescent two-dimensional difference gel electrophoresis (2D-DIGE) to screen for intracellular proteins that were differentially expressed in host cells infected with the two strains. There were 153 proteins with significant different expression (P<0.01) observed, 42 of which were subjected to mass spectrometry, and 24 proteins were identified. PAM cells infected with the virulent strain showed upregulated expression of pyruvate kinase M2 (PKM2), heat shock protein beta-1 (HSPB1), and proteasome subunit alpha type 6 (PSMA6), which were downregulated in cells infected with the attenuated strain. The upregulation of PKM2 provides sufficient energy for viral replication, and the upregulation of HSPB1 inhibits host cell apoptosis and therefore facilitates mass replication of the virulent strain, while the upregulation of PSMA6 facilitates the evasion of immune surveillance by the virus. Studying on those molecules mentioned above may be able to help us to understand some unrevealed details of HP-PRRSV infection, and then help us to decrease its threat to the swine industry in the future.

Indexed as

ProteomicsAnimalsAnimals, NewbornGene Expression ProfilingGene Expression RegulationGene OntologyMacrophages, AlveolarMolecular Sequence AnnotationPorcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusProtein Interaction MapsProteomeReal-Time Polymerase Chain ReactionReproducibility of ResultsSoftwareSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationProteome

Identifiers

PMID24465692
PMCPMC3897507

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.