Evidence map›Paper›PMID 24465575›Full record

ArticlePloS one2014

Presence and analysis of plasmids in human and animal associated arcobacter species.

Laid Douidah, Lieven De Zutter, Filip Van Nieuwerburgh, Dieter Deforce, Hanne Ingmer, Olivier Vandenberg, Anne-Marie Van den Abeele, Kurt Houf

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 28 citations in OpenAlex.

  1. Article
  2. Antimicrobial Resistance and Pathogenicity ofAntibiotics (Basel, Switzerland) · 2023
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  3. Molecular characterization ofFrontiers in cellular and infection microbiology · 2023
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  4. Article
  5. Antimicrobial Susceptibility and Genomic Analysis ofFrontiers in cellular and infection microbiology · 2021
    Article
  6. Article
  7. Bacteria from the GenusApplied and environmental microbiology · 2020
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  8. Genomic Analysis and Antimicrobial Resistance ofFrontiers in microbiology · 2020
    Article
  9. Frontiers in microbiology · 2019
    Article
  10. Genomic Characterization ofFrontiers in microbiology · 2019
    Article
  11. Article
  12. Frontiers in microbiology · 2018
    Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Laid DouidahDepartment of Veterinary Public Health and Food Safety, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium.
Lieven De ZutterDepartment of Veterinary Public Health and Food Safety, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium.
Filip Van NieuwerburghLaboratory of Pharmaceutical Biotechnology, Faculty of Pharmaceutical Sciences, Ghent University, Ghent, Belgium.
Dieter DeforceLaboratory of Pharmaceutical Biotechnology, Faculty of Pharmaceutical Sciences, Ghent University, Ghent, Belgium.
Hanne IngmerDepartment of Veterinary Disease Biology, Faculty of Health and Medical Sciences, Copenhagen University, Frederiksberg, Denmark.
Olivier VandenbergNational Reference Centre for Campylobacter, Department of Microbiology, Iris-Lab, Brussels Public Hospital Network, Brussels, Belgium.
Anne-Marie Van den AbeeleLaboratory of Microbiology, Sint-Lucas hospital, Ghent, Belgium.
Kurt HoufDepartment of Veterinary Public Health and Food Safety, Faculty of Veterinary Medicine, Ghent University, Merelbeke, Belgium.
Ghent University · BEAZ Sint-Lucas · BEUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this study, we report the screening of four Arcobacter species for the presence of small and large plasmids. Plasmids were present in 9.9% of the 273 examined strains. One Arcobacter cryaerophilus and four Arcobacter butzleri plasmids were selected for further sequencing. The size of three small plasmids isolated from A. butzleri and the one from A. cryaerophilus strains ranged between 4.8 and 5.1 kb, and the size of the large plasmid, isolated from A. butzleri, was 27.4 kbp. The G+C content of all plasmids ranged between 25.4% and 26.2%. A total of 95% of the large plasmid sequence represents coding information, which contrasts to the 20 to 30% for the small plasmids. Some of the open reading frames showed a high homology to putative conserved domains found in other related organisms, such as replication, mobilization and genes involved in type IV secretion system. The large plasmid carried 35 coding sequences, including seven genes in a contiguous region of 11.6 kbp that encodes an orthologous type IV secretion system found in the Wolinella succinogenes genome, Helicobacter pylori and Campylobacter jejuni plasmids, which makes this plasmid interesting for further exploration.

Indexed as

AnimalsArcobacterDNA, BacterialGenome, BacterialHumansPlasmidsDNA, Bacterial

Identifiers

PMID24465575
PMCPMC3896396
OpenAlexW2020117070

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.