Evidence map›Paper›PMID 24465567›Full record

ArticlePloS one2014

Intraflagellar transport gene expression associated with short cilia in smoking and COPD.

Justina Hessel, Jonna Heldrich, Jennifer Fuller, Michelle R Staudt, Sharon Radisch, Charleen Hollmann, Ben-Gary Harvey, Robert J Kaner, Jacqueline Salit, Jenny Yee-Levin and 10 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
4.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 88 citations in OpenAlex.

  1. Trial
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Optical Imaging of Cilia in the Head and Neck.Journal of clinical medicine · 2025
    Review
  10. Review
  11. Article
  12. Review
  13. Ciliary Function, Antigen Stasis and Asthma.International journal of molecular sciences · 2024
    Review
  14. Loss of p73 Expression Contributes to Chronic Obstructive Pulmonary Disease.American journal of respiratory and critical care medicine · 2024
    Article
  15. Airway ciliated cells in adult lung homeostasis and COPD.European respiratory review : an official journal of the European Respiratory Society · 2023
    Review
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 2 institutions in 1 country.

Justina HesselDivision of Pulmonary and Critical Care Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Jonna HeldrichDepartment of Genetic Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Jennifer FullerDepartment of Genetic Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Michelle R StaudtDepartment of Genetic Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Sharon RadischDepartment of Genetic Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Charleen HollmannDepartment of Genetic Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Ben-Gary HarveyDivision of Pulmonary and Critical Care Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Robert J KanerDivision of Pulmonary and Critical Care Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Jacqueline SalitDepartment of Genetic Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Jenny Yee-LevinDivision of Pulmonary and Critical Care Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Sriram SridharHoffmann-La Roche, Inc., Nutley, New Jersey, United States of America.
Sreekumar PillaiHoffmann-La Roche, Inc., Nutley, New Jersey, United States of America.
Holly HiltonHoffmann-La Roche, Inc., Nutley, New Jersey, United States of America.
Gerhard WolffHoffmann-La Roche, Inc., Nutley, New Jersey, United States of America.
Hans BitterHoffmann-La Roche, Inc., Nutley, New Jersey, United States of America.
Sudha VisvanathanHoffmann-La Roche, Inc., Nutley, New Jersey, United States of America.
Jay FineHoffmann-La Roche, Inc., Nutley, New Jersey, United States of America.
Christopher S StevensonHoffmann-La Roche, Inc., Nutley, New Jersey, United States of America.
Ronald G CrystalDivision of Pulmonary and Critical Care Medicine, Weill Cornell Medical College, New York, New York, United States of America ; Department of Genetic Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Ann E TilleyDivision of Pulmonary and Critical Care Medicine, Weill Cornell Medical College, New York, New York, United States of America ; Department of Genetic Medicine, Weill Cornell Medical College, New York, New York, United States of America.
Cornell University · USLa Roche College · US

Funding

CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR024996 · NCRR · WEILL MEDICAL COLL OF CORNELL UNIV · PI IMPERATO-MCGINLEY, JULIANNE L · 2007 to 2011
$49.6M
TRANSFORMING TRANSLATIONAL SCIENCE AND EDUCATION TO BENEFIT HUMAN HEALTHUL1RR024143 · NCRR · ROCKEFELLER UNIVERSITY · PI COLLER, BARRY · 2006 to 2011
$49.1M
Clinical and Translational Science CenterUL1TR000457 · NCATS · WEILL MEDICAL COLL OF CORNELL UNIV · PI IMPERATO-MCGINLEY, JULIANNE L · 2012 to 2016
$46.0M
Role of Alveolar Macrophages in the Accelerated Emphysema of HIV-1 PositiveP50HL084936 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CRYSTAL, RONALD G · 2007 to 2011
$14.2M
Overlapping Airway Basal Cell Transcriptome Reprogramming in COPD and Lung CancerR01HL107882 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CRYSTAL, RONALD G · 2011 to 2014
$5.8M
COPD Metabolome, Smoking Oxidants and Aberrant Ciliated Cell FunctionP20HL113443 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI CRYSTAL, RONALD G · 2012 to 2016
$5.3M
Modulation of Genes Responsible for Cilia Length by Exposure to Cigarette SmokeK23HL103837 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI TILLEY, ANN E · 2011 to 2014
$546k
NCATS NIH HHS UL1 TR000457NCRR NIH HHS UL1 RR024143NCRR NIH HHS UL1- RR024143NCRR NIH HHS UL1 RR024996NCRR NIH HHS UL1- RR024996NHLBI NIH HHS 1 K23 HL103837NHLBI NIH HHS 1R01HL107882NHLBI NIH HHS K23 HL103837NHLBI NIH HHS P20 HL113443NHLBI NIH HHS P50 HL084936NHLBI NIH HHS R01 HL107882
6 · The paper itself

Abstract

Smoking and COPD are associated with decreased mucociliary clearance, and healthy smokers have shorter cilia in the large airway than nonsmokers. We hypothesized that changes in cilia length are consistent throughout the airway, and we further hypothesized that smokers with COPD have shorter cilia than healthy smokers. Because intraflagellar transport (IFT) is the process by which cilia of normal length are produced and maintained, and alterations in IFT lead to short cilia in model organisms, we also hypothesized that smoking induces changes in the expression of IFT-related genes in the airway epithelium of smokers and smokers with COPD. To assess these hypotheses, airway epithelium was obtained via bronchoscopic brushing. Cilia length was assessed by measuring 100 cilia (10 cilia on each of 10 cells) per subject and Affymetrix microarrays were used to evaluate IFT gene expression in nonsmokers and healthy smokers in 2 independent data sets from large and small airway as well as in COPD smokers in a data set from the small airway. In the large and small airway epithelium, cilia were significantly shorter in healthy smokers than nonsmokers, and significantly shorter in COPD smokers than in both healthy smokers and nonsmokers. The gene expression data confirmed that a set of 8 IFT genes were down-regulated in smokers in both data sets; however, no differences were seen in COPD smokers compared to healthy smokers. These results support the concept that loss of cilia length contributes to defective mucociliary clearance in COPD, and that smoking-induced changes in expression of IFT genes may be one mechanism of abnormally short cilia in smokers. Strategies to normalize cilia length may be an important avenue for novel COPD therapies.

Indexed as

AdultCiliaFemaleGene ExpressionGene Expression ProfilingHumansMaleMiddle AgedMucociliary ClearancePulmonary Disease, Chronic ObstructiveSmoking

Identifiers

PMID24465567
PMCPMC3896362
OpenAlexW1995995366

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.