Evidence map›Paper›PMID 24465536›Full record

ArticlePloS one2014

Patterning the cone mosaic array in zebrafish retina requires specification of ultraviolet-sensitive cones.

Pamela A Raymond, Steven M Colvin, Zahera Jabeen, Mikiko Nagashima, Linda K Barthel, Jeremy Hadidjojo, Lilia Popova, Vivek R Pejaver, David K Lubensky

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 49 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Retinal Cone Mosaic in sws1-Mutant Medaka (Oryzias latipes), A Teleost.Investigative ophthalmology & visual science · 2022
    Article
  6. Metabolism in the Zebrafish Retina.Journal of developmental biology · 2021
    Review
  7. Article
  8. Article
  9. Article
  10. Daily mitochondrial dynamics in cone photoreceptors.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Rods Contribute to Visual Behavior in Larval Zebrafish.Investigative ophthalmology & visual science · 2020
    Article
  12. Thyroid hormone receptors mediate two distinct mechanisms of long-wavelength vision.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  13. Abnormal Cone and Rod Photoreceptor Morphogenesis in gdf6a Mutant Zebrafish.Investigative ophthalmology & visual science · 2020
    Article
  14. Article
  15. A novel transgenic zebrafish line for red opsin expression in outer segments of photoreceptor cells.Developmental dynamics : an official publication of the American Association of Anatomists · 2018
    Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Pamela A RaymondDepartment of Molecular, Cellular, and Developmental Biology, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
Steven M ColvinDepartment of Molecular, Cellular, and Developmental Biology, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
Zahera JabeenDepartment of Physics, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
Mikiko NagashimaDepartment of Molecular, Cellular, and Developmental Biology, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
Linda K BarthelDepartment of Molecular, Cellular, and Developmental Biology, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
Jeremy HadidjojoDepartment of Physics, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
Lilia PopovaDepartment of Molecular, Cellular, and Developmental Biology, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
Vivek R PejaverDepartment of Molecular, Cellular, and Developmental Biology, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
David K LubenskyDepartment of Physics, College of Literature, Science, and the Arts, University of Michigan, Ann Arbor, Michigan, United States of America.
University of Michigan–Ann Arbor · USMichigan United · US

Funding

VIVARIUM MODULEP30EY007003 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI David Antonetti · 1987 to 2026
$17.6M
Genetic analysis of cone photoreceptor determinationR01EY015509 · NEI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAYMOND, PAMELA A · 2005 to 2007
$908k
NEI NIH HHS P30 EY007003NEI NIH HHS R01 EY015509
6 · The paper itself

Abstract

Cone photoreceptors in teleost fish are organized in precise, crystalline arrays in the epithelial plane of the retina. In zebrafish, four distinct morphological/spectral cone types occupy specific, invariant positions within a regular lattice. The cone lattice is aligned orthogonal and parallel to circumference of the retinal hemisphere: it emerges as cones generated in a germinal zone at the retinal periphery are incorporated as single-cell columns into the cone lattice. Genetic disruption of the transcription factor Tbx2b eliminates most of the cone subtype maximally sensitive to ultraviolet (UV) wavelengths and also perturbs the long-range organization of the cone lattice. In the tbx2b mutant, the other three cone types (red, green, and blue cones) are specified in the correct proportion, differentiate normally, and acquire normal, planar polarized adhesive interactions mediated by Crumbs 2a and Crumbs 2b. Quantitative image analysis of cell adjacency revealed that the cones in the tbx2b mutant primarily have two nearest neighbors and align in single-cell-wide column fragments that are separated by rod photoreceptors. Some UV cones differentiate at the dorsal retinal margin in the tbx2b mutant, although they are severely dysmorphic and are eventually eliminated. Incorporating loss of UV cones during formation of cone columns at the margin into our previously published mathematical model of zebrafish cone mosaic formation (which uses bidirectional interactions between planar cell polarity proteins and anisotropic mechanical stresses in the plane of the retinal epithelium to generate regular columns of cones parallel to the margin) reproduces many features of the pattern disruptions seen in the tbx2b mutant.

Indexed as

AnimalsCell AdhesionCell CommunicationCell DifferentiationCell PolarityEmbryo, NonmammalianGene DeletionGene Expression Regulation, DevelopmentalIn Situ HybridizationMembrane ProteinsModels, BiologicalMorphogenesisRetinal Cone Photoreceptor CellsRetinal Rod Photoreceptor CellsSignal TransductionT-Box Domain ProteinsCrb2a protein, zebrafishcrb2b protein, zebrafishMembrane ProteinsT-Box Domain Proteinstbx2b protein, zebrafishZebrafish Proteins

Identifiers

PMID24465536
PMCPMC3897441
OpenAlexW1974711737

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.