Evidence map›Paper›PMID 24465002›Full record

ArticleEukaryotic cell2014

Transcription factor RFX1 is crucial for maintenance of genome integrity in Fusarium graminearum.

Kyunghun Min, Hokyoung Son, Jae Yun Lim, Gyung Ja Choi, Jin-Cheol Kim, Steven D Harris, Yin-Won Lee

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

  1. Review
  2. Article
  3. Properties of Putative APSES Transcription Factor AfpA inJournal of fungi (Basel, Switzerland) · 2025
    Article
  4. Article
  5. Article
  6. Article
  7. Conservation and Expansion of Transcriptional Factor Repertoire in thebioRxiv : the preprint server for biology · 2023
    Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. Frontiers in microbiology · 2019
    Article
  14. Article
  15. TheFrontiers in microbiology · 2018
    Article
  16. Article
  17. Article
  18. Cell Biology of Hyphal Growth.Microbiology spectrum · 2017
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Kyunghun MinDepartment of Agricultural Biotechnology and Center for Fungal Pathogenesis, Seoul National University, Seoul, Republic of Korea.
Hokyoung Son
Jae Yun Lim
Gyung Ja Choi
Jin-Cheol Kim
Steven D Harris
Yin-Won Lee
Seoul National University · KRKorea Research Institute of Chemical Technology · KRUniversity of Nebraska–Lincoln · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The survival of cellular organisms depends on the faithful replication and transmission of DNA. Regulatory factor X (RFX) transcription factors are well conserved in animals and fungi, but their functions are diverse, ranging from the DNA damage response to ciliary gene regulation. We investigated the role of the sole RFX transcription factor, RFX1, in the plant-pathogenic fungus Fusarium graminearum. Deletion of rfx1 resulted in multiple defects in hyphal growth, conidiation, virulence, and sexual development. Deletion mutants of rfx1 were more sensitive to various types of DNA damage than the wild-type strain. Septum formation was inhibited and micronuclei were produced in the rfx1 deletion mutants. The results of the neutral comet assay demonstrated that disruption of rfx1 function caused spontaneous DNA double-strand breaks (DSBs). The transcript levels of genes involved in DNA DSB repair were upregulated in the rfx1 deletion mutants. DNA DSBs produced micronuclei and delayed septum formation in F. graminearum. Green fluorescent protein (GFP)-tagged RFX1 localized in nuclei and exhibited high expression levels in growing hyphae and conidiophores, where nuclear division was actively occurring. RNA-sequencing-based transcriptomic analysis revealed that RFX1 suppressed the expression of many genes, including those required for the repair of DNA damage. Taken together, these findings indicate that the transcriptional repressor rfx1 performs crucial roles during normal cell growth by maintaining genome integrity.

Indexed as

Genome, FungalGenomic InstabilityAmino Acid SequenceDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA RepairFungal ProteinsFusariumGene DeletionGene Expression Regulation, FungalMolecular Sequence DataRegulatory Factor X Transcription FactorsRNA, MessengerTranscription FactorsUp-RegulationDNA-Binding ProteinsFungal ProteinsRegulatory Factor X Transcription FactorsRNA, MessengerTranscription Factors

Identifiers

PMID24465002
PMCPMC3957585
OpenAlexW2013622382

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.