Evidence map›Paper›PMID 24464647›Full record

ArticleCytometry. Part A : the journal of the International Society for Analytical Cytology2014

Concomitant evaluation of PMA+ionomycin-induced kinase phosphorylation and cytokine production in T cell subsets by flow cytometry.

Timothy Q Crawford, Emilie Jalbert, Lishomwa C Ndhlovu, Jason D Barbour

Open access · bronzeAbstract read
In one paragraph

Article in Cytometry. Part A : the journal of the International Society for Analytical Cytology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.1field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 38 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Timothy Q CrawfordHawaii Center for HIV/AIDS Immunology and Genetics Laboratory, Department of Tropical Medicine, Medical Microbiology and Pharmacology, John A. Burns School of Medicine, University of Hawaii at Manoa, Honolulu, Hawaii.
Emilie Jalbert
Lishomwa C Ndhlovu
Jason D Barbour
University of Hawaiʻi at Mānoa · US

Funding

Immunity of neoantigen response in HCV, HIV, and HCV-HIVR21AI066957 · NIAID · CASE WESTERN RESERVE UNIVERSITY · PI ANTHONY, DONALD D · 2007 to 2010
$427k
Bioinformatic Mapping of HIV-1 Nef Manipulation of T-Cell Activation and FunctionR21AI076014 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BARBOUR, JASON DAVID · 2007 to 2008
$421k
NIAID NIH HHS K01 AI076014NIAID NIH HHS R21 AI066957NIAID NIH HHS R21 AI076014
6 · The paper itself

Abstract

Methods to detect intracellular kinase signaling intermediates by flow cytometry have been recently developed. Termed "phospho-flow," these methods employ fluorescence-conjugated monoclonal antibodies that recognize phosphorylated epitopes of intracellular kinases, and may be combined with surface phenotypic markers to observe changes in kinase pathways by cellular subset. Effector functions, like cytokine production, are processes intrinsically linked to intracellular signaling and kinase activity within each cell. Methodologies that would simultaneously detect changes to signaling pathways as well as effector responses at the single-cell level would allow for mapping of the functional consequences induced by signaling pathway modifications. However, there are challenges to developing such a combined protocol, relating to the different kinetics of rapid signaling events and the more prolonged time required to induce and observe cytokine responses. In this report, we describe the development of an assay that accommodates differences in protocol conditions and response kinetics, merging phospho-flow cytometry, and intracellular cytokine staining methods into a single experimental protocol. We examined intracellular ERK1/2 phosphorylation and IFN-γ production by CD4+ and CD8+ T cells upon polyclonal stimulation with PMA and ionomycin, while monitoring expression of the cytolytic molecule perforin and the T cell activation marker CD38. We present a method that allows observation of kinase phosphorylation and cytokine production within the same cell after stimuli, while maintaining a stable cellular phenotype. Monitoring of signaling and effector functions in distinct immune subsets provides a platform to investigate and relate intracellular kinase signaling activity to immune cell effector function and phenotype in disease states.

Indexed as

Flow CytometryAntibodies, MonoclonalCytokinesHumansIonomycinLymphocyte ActivationPhosphorylationPhosphotransferasesSignal TransductionTetradecanoylphorbol AcetateT-Lymphocyte SubsetsAntibodies, MonoclonalCytokinesIonomycinPhosphotransferasesTetradecanoylphorbol AcetateCD38ERKHLA-DRICSIFN-γimmune effector functionperforinphosflowphospho-flow intracellular cytokine stainingT cell

Identifiers

PMID24464647
PMCPMC13472587
OpenAlexW1495760233

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.