Evidence map›Paper›PMID 24462897›Full record

ArticleJournal of theoretical biology2014

Spatial invasion dynamics on random and unstructured meshes: implications for heterogeneous tumor populations.

V S K Manem, M Kohandel, N L Komarova, S Sivaloganathan

Abstract read
In one paragraph

Article in Journal of theoretical biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Substrate geometry affects population dynamics in a bacterial biofilm.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  2. Evolutionary dynamics of mutants that modify population structure.Journal of the Royal Society, Interface · 2023
    Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. The Moran process on 2-chromatic graphs.PLoS computational biology · 2020
    Article
  8. Is cell migration a selectable trait in the natural evolution of cancer development?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Article
  9. Article
  10. Article
  11. Spatial mutation patterns as markers of early colorectal tumor cell mobility.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

V S K ManemDepartment of Applied Mathematics, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1.
M KohandelDepartment of Applied Mathematics, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1; Center for Mathematical Medicine, Fields Institute for Research in Mathematical Sciences, Toronto, ON, Canada M5T 3J1. Electronic address: kohandel@uwaterloo.ca.
N L KomarovaDepartment of Mathematics, University of California Irvine, Irvine, CA 92697, United States.
S SivaloganathanDepartment of Applied Mathematics, University of Waterloo, Waterloo, Ontario, Canada N2L 3G1; Center for Mathematical Medicine, Fields Institute for Research in Mathematical Sciences, Toronto, ON, Canada M5T 3J1.

Funding

Measuring Methylation Kinetics in Cancer Cells: Computations and ExperimentsR01CA129286 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI KOMAROVA, NATALIA L · 2008 to 2012
$1.5M
NCI NIH HHS 1R01CA129286-01A1NCI NIH HHS R01 CA129286
6 · The paper itself

Abstract

In this work we discuss a spatial evolutionary model for a heterogeneous cancer cell population. We consider the gain-of-function mutations that not only change the fitness potential of the mutant phenotypes against normal background cells but may also increase the relative motility of the mutant cells. The spatial modeling is implemented as a stochastic evolutionary system on a structured grid (a lattice, with random neighborhoods, which is not necessarily bi-directional) or on a two-dimensional unstructured mesh, i.e. a bi-directional graph with random numbers of neighbors. We present a computational approach to investigate the fixation probability of mutants in these spatial models. Additionally, we examine the effect of the migration potential on the spatial dynamics of mutants on unstructured meshes. Our results suggest that the probability of fixation is negatively correlated with the width of the distribution of the neighborhood size. Also, the fixation probability increases given a migration potential for mutants. We find that the fixation probability (of advantaged, disadvantaged and neutral mutants) on unstructured meshes is relatively smaller than the corresponding results on regular grids. More importantly, in the case of neutral mutants the introduction of a migration potential has a critical effect on the fixation probability and increases this by orders of magnitude. Further, we examine the effect of boundaries and as intuitively expected, the fixation probability is smaller on the boundary of regular grids when compared to its value in the bulk. Based on these computational results, we speculate on possible better therapeutic strategies that may delay tumor progression to some extent.

Indexed as

Cell MovementHumansMutationNeoplasm InvasivenessNeoplasmsCell migrationCellular automataEvolutionary modelingMath oncologyRandom meshes

Identifiers

PMID24462897
PMCPMC4117853

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.