Evidence map›Paper›PMID 24462691›Full record

ArticleFEBS letters2014

Steady-state kinetic mechanism of LodA, a novel cysteine tryptophylquinone-dependent oxidase.

Esha Sehanobish, Sooim Shin, Antonio Sanchez-Amat, Victor L Davidson

Open access · bronzeAbstract read
In one paragraph

Article in FEBS letters, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Kinetic characteristics of L-lysineBiochemistry and biophysics reports · 2017
    Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Esha SehanobishBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, Orlando, FL 32827, United States.
Sooim ShinBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, Orlando, FL 32827, United States.
Antonio Sanchez-AmatDepartment of Genetics and Microbiology, University of Murcia, Murcia 30100, Spain.
Victor L DavidsonBurnett School of Biomedical Sciences, College of Medicine, University of Central Florida, Orlando, FL 32827, United States. Electronic address: victor.davidson@ucf.edu.
University of Central Florida · USUniversidad de Murcia · ES

Funding

Structure Function & Biosynthesis of Respiratory EnzymesR37GM041574 · NIGMS · UNIVERSITY OF MISSISSIPPI MED CTR · PI DAVIDSON, VICTOR L · 2009 to 2018
$3.4M
NIGMS NIH HHS R37 GM041574NIGMS NIH HHS R37GM41574
6 · The paper itself

Abstract

LodA is a novel lysine-ε-oxidase which possesses a cysteine tryptophylquinone cofactor. It is the first tryptophylquinone enzyme known to function as an oxidase. A steady-state kinetic analysis shows that LodA obeys a ping-pong kinetic mechanism with values of kcat of 0.22±0.04 s(-1), Klysine of 3.2±0.5 μM and KO2 of 37.2±6.1 μM. The kcat exhibited a pH optimum at 7.5 while kcat/Klysine peaked at 7.0 and remained constant to pH 8.5. Alternative electron acceptors could not effectively substitute for O2 in the reaction. A mechanism for the reductive half reaction of LodA is proposed that is consistent with the ping-pong kinetics.

Indexed as

2-Aminoadipic AcidBacterial ProteinsCoenzymesDipeptidesHydrogen-Ion ConcentrationIndolequinonesKineticsLysineMarinomonasModels, ChemicalProteins2-Aminoadipic AcidallysineBacterial ProteinsCoenzymescysteine tryptophylquinoneDipeptidesIndolequinonesLysinemarinocine protein, Marinomonas mediterraneaProteinsAmine oxidaseCofactorLysine oxidaseQuinoproteinRedox enzyme

Identifiers

PMID24462691
PMCPMC3972763
OpenAlexW2116485285

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.