Evidence map›Paper›PMID 24457212›Full record

ArticleScience (New York, N.Y.)2014

Origin and spread of de novo genes in Drosophila melanogaster populations.

Li Zhao, Perot Saelao, Corbin D Jones, David J Begun

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 152 papers.

0numbers the graph read from it
0cells of the map it votes in
152citing papers in PubMed
32.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

152 citing papers in PubMed, 272 citations in OpenAlex.

  1. DetectNAR genomics and bioinformatics · 2026
    Article
  2. Review
  3. Impact of GC content on de novo gene birth.Nature communications · 2026
    Article
  4. Article
  5. Review
  6. De Novo Genes: Current Status and Future Goals.Genome biology and evolution · 2025
    Article
  7. Expression of De Novo Open Reading Frames in Natural Populations of Drosophila melanogaster.Journal of experimental zoology. Part B, Molecular and developmental evolution · 2025
    Article
  8. Review
  9. Emergence of antiphage functions from random sequence libraries reveals mechanisms of gene birth.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. An orphan gene is essential for efficient sperm entry into eggs inbioRxiv : the preprint server for biology · 2024
    Article

92 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Li ZhaoDepartment of Evolution and Ecology, University of California, Davis, CA 95616, USA.
Perot Saelao
Corbin D Jones
David J Begun
University of California, Davis · US

Funding

Genomic analysis of adaptation in DrosophilaR01GM084056 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BEGUN, DAVID J · 2009 to 2012
$1.2M
NIGMS NIH HHS GM084056NIGMS NIH HHS R01 GM084056
6 · The paper itself

Abstract

Comparative genomic analyses have revealed that genes may arise from ancestrally nongenic sequence. However, the origin and spread of these de novo genes within populations remain obscure. We identified 142 segregating and 106 fixed testis-expressed de novo genes in a population sample of Drosophila melanogaster. These genes appear to derive primarily from ancestral intergenic, unexpressed open reading frames, with natural selection playing a significant role in their spread. These results reveal a heretofore unappreciated dynamism of gene content.

Indexed as

Evolution, MolecularGenes, InsectAnimalsDrosophila melanogasterFemaleGene ExpressionGene Expression RegulationGenetic Association StudiesMaleOpen Reading FramesSelection, GeneticTestis

Identifiers

PMID24457212
PMCPMC4391638
OpenAlexW2086633865

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.