Evidence map›Paper›PMID 24454898›Full record

ArticlePloS one2014

Identification of critical regions and candidate genes for cardiovascular malformations and cardiomyopathy associated with deletions of chromosome 1p36.

Hitisha P Zaveri, Tyler F Beck, Andrés Hernández-García, Katharine E Shelly, Tara Montgomery, Arie van Haeringen, Britt-Marie Anderlid, Chirag Patel, Himanshu Goel, Gunnar Houge and 4 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it, 59 citations in OpenAlex.

  1. Circulation. Genomic and precision medicine · 2023
    Pooled it
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  4. Review
  5. Article
  6. Article
  7. Human Genetics of Ebstein Anomaly.Advances in experimental medicine and biology · 2024
    Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Psychiatric Comorbidities in 1p36 Deletion Syndrome and Their Treatment-A Case Report.International journal of environmental research and public health · 2021
    Article
  15. Article
  16. Article
  17. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 8 institutions in 6 countries.

Hitisha P ZaveriDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Tyler F BeckDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Andrés Hernández-GarcíaDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Katharine E ShellyDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Tara MontgomeryInstitute of Genetic Medicine, Newcastle University, Newcastle upon Tyne, United Kingdom.
Arie van HaeringenDepartment of Clinical Genetics, Leiden University Medical Center, Leiden, The Netherlands.
Britt-Marie AnderlidClinical Genetic Department, Karolinska University Hospital and Institution of Molecular Medicine and Surgery, Karolinska Institutet, Stockholm, Sweden.
Chirag PatelDepartment of Clinical Genetics, Birmingham Women's Hospital, Birmingham, United Kingdom.
Himanshu GoelFaculty of Health and Medicine, University of Newcastle, Callaghan, New South Wales, Australia.
Gunnar HougeCenter for Medical Genetics and Molecular Medicine, Haukeland University Hospital, Bergen, Norway.
Bernice E MorrowDepartment of Genetics, Albert Einstein College of Medicine, Bronx, New York, United States of America.
Sau Wai CheungDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Seema R LalaniDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America.
Daryl A ScottDepartment of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America ; Department of Molecular Physiology and Biophysics, Baylor College of Medicine, Houston, Texas, United States of America.
Baylor College of Medicine · USAlbert Einstein College of Medicine · USBirmingham Women's Hospital · GBHaukeland University Hospital · NOKarolinska Institutet · SELeiden University Medical Center · NLNewcastle University · GBUniversity of Newcastle Australia · AU

Funding

PROGRAM IN HUMAN MOLECULAR GENETICST32GM008307 · NIGMS · BAYLOR COLLEGE OF MEDICINE · PI SHAULSKY, GAD · 1990 to 2020
$6.6M
NIGMS NIH HHS T32 GM008307
6 · The paper itself

Abstract

Cardiovascular malformations and cardiomyopathy are among the most common phenotypes caused by deletions of chromosome 1p36 which affect approximately 1 in 5000 newborns. Although these cardiac-related abnormalities are a significant source of morbidity and mortality associated with 1p36 deletions, most of the individual genes that contribute to these conditions have yet to be identified. In this paper, we use a combination of clinical and molecular cytogenetic data to define five critical regions for cardiovascular malformations and two critical regions for cardiomyopathy on chromosome 1p36. Positional candidate genes which may contribute to the development of cardiovascular malformations associated with 1p36 deletions include DVL1, SKI, RERE, PDPN, SPEN, CLCNKA, ECE1, HSPG2, LUZP1, and WASF2. Similarly, haploinsufficiency of PRDM16-a gene which was recently shown to be sufficient to cause the left ventricular noncompaction-SKI, PRKCZ, RERE, UBE4B and MASP2 may contribute to the development of cardiomyopathy. When treating individuals with 1p36 deletions, or providing prognostic information to their families, physicians should take into account that 1p36 deletions which overlie these cardiac critical regions may portend to cardiovascular complications. Since several of these cardiac critical regions contain more than one positional candidate gene-and large terminal and interstitial 1p36 deletions often overlap more than one cardiac critical region-it is likely that haploinsufficiency of two or more genes contributes to the cardiac phenotypes associated with many 1p36 deletions.

Indexed as

Chromosomes, Human, Pair 1Gene DeletionCardiovascular AbnormalitiesCardiovascular DiseasesHumans

Identifiers

PMID24454898
PMCPMC3893250
OpenAlexW2081445260

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.