Evidence map›Paper›PMID 24452267›Full record

ArticleGenes and immunity

Diubiquitin (Ubd) is a susceptibility gene for virus-triggered autoimmune diabetes in rats.

L Cort, M Habib, R A Eberwine, M J Hessner, J P Mordes, E P Blankenhorn

Open access · bronzeAbstract read
In one paragraph

Article in Genes and immunity. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
0.9field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

L CortDepartment of Microbiology and Immunology, Drexel University College of Medicine, Philadelphia, PA, USA.
M HabibDepartment of Medicine/Endocrinology, University of Massachusetts Medical School, Worcester, MA, USA.
R A EberwineDepartment of Microbiology and Immunology, Drexel University College of Medicine, Philadelphia, PA, USA.
M J HessnerDepartment of Pediatrics, The Medical College of Wisconsin, Milwaukee, WI, USA.
J P MordesDepartment of Medicine/Endocrinology, University of Massachusetts Medical School, Worcester, MA, USA.
E P BlankenhornDepartment of Microbiology and Immunology, Drexel University College of Medicine, Philadelphia, PA, USA.
Drexel University · USUniversity of Massachusetts Chan Medical School · USMedical College of Wisconsin · US

Funding

Dissection of cellular interactions in T1DM with integrated functional genomicsR01AI078713 · NIAID · MEDICAL COLLEGE OF WISCONSIN · PI HESSNER, MARTIN J · 2009 to 2013
$1.7M
Autoimmunity-associated genes in new rat models: validation of human GWAS genesR21AI088480 · NIAID · DREXEL UNIVERSITY · PI BLANKENHORN, ELIZABETH P · 2010 to 2011
$444k
NIAID NIH HHS R01 AI078713NIAID NIH HHS R01AI078713NIAID NIH HHS R21 AI088480NIAID NIH HHS R21AI088480
6 · The paper itself

Abstract

Genetic studies of type 1 diabetes (T1D) have been advanced by comparative analysis of multiple susceptible and resistant rat strains with a permissive class II MHC haplotype, RT1(u). LEW.1WR1 (but not resistant LEW.1W or WF) rats are susceptible to T1D induced by a TLR3 agonist polyinosinic:polycytidylic acid followed by infection with parvovirus. We have mapped genetic loci for virus-induced T1D susceptibility, identifying a major susceptibility locus (Iddm37) near the MHC. The Iddm37 homologs on mouse and human chromosomes are also diabetes linked. We report that a major effect gene within Iddm37 is diubiquitin (Ubd). Gene expression profiling of pancreatic lymph nodes in susceptible and resistant rats during disease induction showed differences in Ubd transcript abundance. The LEW.1WR1 Ubd promoter allele leads to higher inducible levels of UBD than that of LEW.1W or WF. Using zinc-finger nucleases , we deleted a segment of the LEW.1WR1 Ubd gene and eliminated its expression. UBD-deficient rats show substantially reduced diabetes after viral infection. Complementary studies show that there may be another diabetes gene in addition to Ubd in the Iddm37 interval. These data prove that Ubd is a diabetes susceptibility gene, providing insight into the interplay of multiple genes and environmental factors in T1D susceptibility.

Indexed as

Genetic Predisposition to DiseaseParvovirinaeAllelesAnimalsDiabetes Mellitus, Type 1Disease Models, AnimalDisease SusceptibilityGene ExpressionGene Expression ProfilingGenetic Complementation TestGenotypeMice, KnockoutPolymorphism, Single NucleotidePromoter Regions, GeneticRatsUbiquitinsUbD protein, ratUbiquitins

Identifiers

PMID24452267
PMCPMC4260472
OpenAlexW2088068543

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.