Evidence map›Paper›PMID 24452167›Full record

ArticleJournal of clinical microbiology2014

Twenty-five-year outbreak of Pseudomonas aeruginosa infecting individuals with cystic fibrosis: identification of the prairie epidemic strain.

Michael D Parkins, Bryan A Glezerson, Christopher D Sibley, Kristen A Sibley, Jessica Duong, Swathi Purighalla, Christopher H Mody, Matthew L Workentine, Douglas G Storey, Michael G Surette and 1 more

Open access · bronzeAbstract read
In one paragraph

Article in Journal of clinical microbiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Epidemiology and impact of methicillin-sensitiveAntimicrobial agents and chemotherapy · 2023
    Article
  6. Frontiers in microbiology · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Cystic Fibrosis Patients Infected With EpidemicFrontiers in cellular and infection microbiology · 2020
    Article
  12. Review
  13. Infection and drug resistance · 2020
    Article
  14. Epidemiology ofFrontiers in microbiology · 2020
    Article
  15. Article
  16. Review
  17. Article
  18. Epidemiology and natural history ofERJ open research · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Michael D ParkinsThe University of Calgary, Calgary, Alberta, Canada.
Bryan A Glezerson
Christopher D Sibley
Kristen A Sibley
Jessica Duong
Swathi Purighalla
Christopher H Mody
Matthew L Workentine
Douglas G Storey
Michael G Surette
Harvey R Rabin
University of Calgary · CAMcMaster University · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Transmissible strains of Pseudomonas aeruginosa have been described for cystic fibrosis (CF) and may be associated with a worse prognosis. Using a comprehensive strain biobank spanning 3 decades, we sought to determine the prevalence and stability of chronic P. aeruginosa infection in an adult population. P. aeruginosa isolates from sputum samples collected at initial enrollment in our adult clinic and at the most recent clinic visit were examined by a combination of pulsed-field gel electrophoresis and multilocus sequence typing and compared against a collection of established transmissible and local non-CF bronchiectasis (nCFB) isolates. A total of 372 isolates from 107 patients, spanning 674 patient-years, including 66 patients with matched isolates from initial and final encounters, were screened. A novel clone with increased antibacterial resistance, termed the prairie epidemic strain (PES), was found in 29% (31/107 patients) of chronically infected patients referred from multiple prairie-based CF centers. This isolate was not found in those diagnosed with CF as adults or in a control population with nCFB. While 90% (60/66 patients) of patients had stable infection over a mean of 10.8 years, five patients experienced strain displacement of unique isolates, with PES occurring within 2 years of transitioning to adult care. PES has been present in our cohort since at least 1987, is unique to CF, generally establishes chronic infection during childhood, and has been found in patients at the time of transition of patients from multiple prairie-based CF clinics, suggesting broad endemicity. Studies are under way to evaluate the clinical implications of PES infection.

Indexed as

EpidemicsAdultCluster AnalysisCystic FibrosisDNA, BacterialDrug Resistance, BacterialElectrophoresis, Gel, Pulsed-FieldGenotypeHumansMolecular EpidemiologyMultilocus Sequence TypingPseudomonas aeruginosaPseudomonas InfectionsDNA, Bacterial

Identifiers

PMID24452167
PMCPMC3993468
OpenAlexW2142418684

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.