Evidence map›Paper›PMID 24451200›Full record

ArticleThe EMBO journal2014

Tissue-specific pioneer factors associate with androgen receptor cistromes and transcription programs.

Päivi Pihlajamaa, Biswajyoti Sahu, Lauri Lyly, Viljami Aittomäki, Sampsa Hautaniemi, Olli A Jänne

Abstract read
In one paragraph

Article in The EMBO journal, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed, 2 pooled it
8.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 2 syntheses or guidelines pooled it, 132 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  4. Article
  5. Article
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  10. Androgens as the "old age stick" in skeletal muscle.Cell communication and signaling : CCS · 2025
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  13. The androgen receptor in mesenchymal progenitors regulates skeletal muscle mass viaProceedings of the National Academy of Sciences of the United States of America · 2024
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8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Päivi PihlajamaaInstitute of Biomedicine University of Helsinki, Helsinki, Finland.
Biswajyoti Sahu
Lauri Lyly
Viljami Aittomäki
Sampsa Hautaniemi
Olli A Jänne
University of Helsinki · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Androgen receptor (AR) binds male sex steroids and mediates physiological androgen actions in target tissues. ChIP-seq analyses of AR-binding events in murine prostate, kidney and epididymis show that in vivo AR cistromes and their respective androgen-dependent transcription programs are highly tissue specific mediating distinct biological pathways. This high order of tissue specificity is achieved by the use of exclusive collaborating factors in the three androgen-responsive tissues. We find two novel collaborating factors for AR signaling in vivo--Hnf4α (hepatocyte nuclear factor 4α) in mouse kidney and AP-2α (activating enhancer binding protein 2α) in mouse epididymis--that define tissue-specific AR recruitment. In mouse prostate, FoxA1 serves for the same purpose. FoxA1, Hnf4α and AP-2α motifs are over-represented within unique AR-binding loci, and the cistromes of these factors show substantial overlap with AR-binding events distinct to each tissue type. These licensing or pioneering factors are constitutively bound to chromatin and guide AR to specific genomic loci upon hormone exposure. Collectively, liganded receptor and its DNA-response elements are required but not sufficient for establishment of tissue-specific transcription programs.

Indexed as

AnimalsCell LineChromatinChromatin ImmunoprecipitationEpididymisGene Expression ProfilingGene Expression RegulationHepatocyte Nuclear Factor 3-alphaHepatocyte Nuclear Factor 4KidneyMaleMiceMice, Inbred ICROrchiectomyOrgan SpecificityProstateChromatinFoxa1 protein, mouseHepatocyte Nuclear Factor 3-alphaHepatocyte Nuclear Factor 4Hnf4a protein, mouseReceptors, AndrogenRNA, Small InterferingTacrolimus Binding Protein 5Tacrolimus Binding ProteinsTestosteroneTranscription Factor AP-2

Identifiers

PMID24451200
PMCPMC3989639
OpenAlexW2108541471

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.