Evidence map›Paper›PMID 24446183›Full record

ArticleEnvironmental and molecular mutagenesis2014

Alterations of the lung methylome in allergic airway hyper-responsiveness.

Robert Ys Cheng, Yan Shang, Nathachit Limjunyawong, Tyna Dao, Sandhya Das, Richard Rabold, James Sk Sham, Wayne Mitzner, Wan-Yee Tang

Abstract read
In one paragraph

Article in Environmental and molecular mutagenesis, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 45 citations in OpenAlex.

  1. Frontiers in immunology · 2026
    Article
  2. Review
  3. Article
  4. Epigenetic Reprogramming Drives Epithelial Disruption in Chronic Obstructive Pulmonary Disease.American journal of respiratory cell and molecular biology · 2024
    Article
  5. Article
  6. A leak-free head-out plethysmography system to accurately assess lung function in mice.Journal of applied physiology (Bethesda, Md. : 1985) · 2022
    Article
  7. TET2 Regulates 5-Hydroxymethylcytosine Signature and CD4Allergy, asthma & immunology research · 2022
    Article
  8. Review
  9. Article
  10. Role of Isocitrate Dehydrogenase 2 on DNA Hydroxymethylation in Human Airway Smooth Muscle Cells.American journal of respiratory cell and molecular biology · 2020
    Article
  11. Review
  12. A WAO - ARIA - GAThe World Allergy Organization journal · 2020
    Article
  13. IgE Levels toFrontiers in immunology · 2020
    Article
  14. Article
  15. Review
  16. House Dust Mite Allergy Under Changing Environments.Allergy, asthma & immunology research · 2019
    Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Robert Ys ChengRadiation Biology Branch, National Cancer Institute, National Institutes of Health, Bethesda, Maryland, United States.
Yan Shang
Nathachit Limjunyawong
Tyna Dao
Sandhya Das
Richard Rabold
James Sk Sham
Wayne Mitzner
Wan-Yee Tang
Johns Hopkins University · USChanghai Hospital · CNNational Cancer Institute · US

Funding

THE INTEGRATED FUNCTION OF RESPIRATION &CIRCULATIONP01HL010342 · NHLBI · JOHNS HOPKINS UNIVERSITY · PI MITZNER, WAYNE · 1985 to 2015
$24.4M
PILOT STUDY--ACID FOG, AN EXPERIMENTAL MODELP30ES003819 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI GROOPMAN, JOHN D · 1985 to 2012
$22.6M
Traning Program in Environmental Health SciencesT32ES007141 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI Marsha Wills-Karp · 1985 to 2026
$22.2M
Estrogens/Xenoestrogens and Epigenetic Regulation of Gene ExpressionR00ES016817 · NIEHS · JOHNS HOPKINS UNIVERSITY · PI TANG, WAN-YEE · 2010 to 2012
$747k
NCEH CDC HHS P30ES03819-EHSNHLBI NIH HHS HL10342NHLBI NIH HHS P01 HL010342NIEHS NIH HHS ES016887NIEHS NIH HHS P30 ES003819NIEHS NIH HHS R00 ES016817NIEHS NIH HHS T32 ES007141
6 · The paper itself

Abstract

Asthma is a chronic airway disorder characterized by recurrent attacks of breathlessness and wheezing, affecting 300 million people around the world (available at: www.who.int). To date, genetic factors associated with asthma susceptibility have been unable to explain the full etiology of asthma. Recent studies have demonstrated that the epigenetic disruption of gene expression plays an equally important role in the development of asthma through interaction with our environment. We sensitized 6-week-old C57BL/6J mice with house-dust-mite (HDM) extracts intraperitoneally followed by 5 weeks of exposure to HDM challenges (three times a week) intratracheally. HDM-exposed mice showed an increase in airway hyper-responsiveness (AHR) and inflammation together with structural remodeling of the airways. We applied methylated DNA immunoprecipitation-next generation sequencing (MeDIP-seq) for profiling of DNA methylation changes in the lungs in response to HDM. We observed about 20 million reads by a single-run of massive parallel sequencing. We performed bioinformatics and pathway analysis on the raw sequencing data to identify differentially methylated candidate genes in HDM-exposed mice. Specifically, we have revealed that the transforming growth factor beta signaling pathway is epigenetically modulated by chronic exposure to HDM. Here, we demonstrated that a specific allergen may play a role in AHR through an epigenetic mechanism by disrupting the expression of genes in lungs that might be involved in airway inflammation and remodeling. Our findings provide new insights into the potential mechanisms by which environmental allergens induce allergic asthma and such insights may assist in the development of novel preventive and therapeutic options for this debilitative disease.

Indexed as

DNA MethylationAnimalsAsthmaBronchoalveolar Lavage FluidCells, CulturedComputational BiologyEpigenesis, GeneticGene Expression ProfilingHigh-Throughput Nucleotide SequencingHypersensitivityImmunoprecipitationInflammationLungMaleMiceMice, Inbred C57BLTransforming Growth Factor betaairway hyperresponsivenessasthmaDNA methylationhouse dust mitenext generation sequencing

Identifiers

PMID24446183
PMCPMC4125208
OpenAlexW1881478700

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.