Evidence map›Paper›PMID 24444367›Full record

ArticleBiochemistry2014

A GMC oxidoreductase homologue is required for acetylation of glycopeptidolipid in Mycobacterium smegmatis.

Jin Gao, Nicole S Sampson

Open access · bronzeAbstract read
In one paragraph

Article in Biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. The unusual convergence of steroid catabolic pathways inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Review
  4. Article
  5. Pathogen roid rage: cholesterol utilization by Mycobacterium tuberculosis.Critical reviews in biochemistry and molecular biology
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Jin GaoDepartment of Chemistry, Stony Brook University , Stony Brook, New York 11794-3400, United States.
Nicole S Sampson
Stony Brook University · US

Funding

CHOLESTEROL OXIDASE LOOP RESIDUES &CATALYSISR01HL053306 · NHLBI · STATE UNIVERSITY NEW YORK STONY BROOK · PI SAMPSON, NICOLE S · 2001 to 2009
$2.6M
Acquisition of a Thermo Scientific Orbitrap XL Hybrid FT Mass SpectrometerS10RR025072 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI IDEN, CHARLES R · 2008 to 2008
$851k
Investigation of Mycobacterial GMC Oxidoreductase Rv3409cR21AI085349 · NIAID · STATE UNIVERSITY NEW YORK STONY BROOK · PI SAMPSON, NICOLE S · 2010 to 2011
$422k
MALDI-TOF SPECTROM: PROTEIN: INHIBIT FATTY ACID BIOSYNTHESIS IN M TUBERCULOSISS10RR021008 · NCRR · STATE UNIVERSITY NEW YORK STONY BROOK · PI SAMPSON, NICOLE S. · 2005 to 2005
$270k
CHOLESTEROL OXIDASE LOOP RESIDUES AND CATALYSISR29HL053306 · NHLBI · STATE UNIVERSITY NEW YORK STONY BROOK · PI SAMPSON, NICOLE S. · 1995 to 2000
$110k
NCRR NIH HHS RR025072NCRR NIH HHS S10 RR021008NHLBI NIH HHS HL53306NHLBI NIH HHS R01 HL053306NIAID NIH HHS AI85349NIAID NIH HHS R21 AI085349PHS HHS SRR021008
6 · The paper itself

Abstract

The Mycobacterium tuberculosis Rv3409c gene is required for modulation of the Toll-like receptor 2 (TLR-2) signaling response in infected macrophages. Although each is annotated as encoding a cholesterol oxidase, neither Rv3409c nor its ortholog MSMEG1604 is required for the metabolism of cholesterol in mycobacteria. Here we report that a unique lipid, L1334, accumulates in a MSMEG1604 transposon mutant in the Mycobacterium smegmatis cell envelope. L1334 is a polar glycopeptidolipid that is hyperrhamnosylated and in which the 6-deoxytalose moiety is not acetylated. The alteration of L1334 acetylation is consistent with a reduced level of interference with TLR-2 signaling in mutant infected macrophages.

Indexed as

AcetylationAlcohol OxidoreductasesCholine DehydrogenaseGlucose DehydrogenasesGlycopeptidesMutationMycobacterium smegmatisSpectrometry, Mass, Matrix-Assisted Laser Desorption-IonizationAlcohol OxidoreductasesCholine DehydrogenaseGlucose DehydrogenasesGlycopeptides

Identifiers

PMID24444367
PMCPMC3985799
OpenAlexW2329512643

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.