Evidence map›Paper›PMID 24444349›Full record

ArticleBiochemistry2014

The linker between the dimerization and catalytic domains of the CheA histidine kinase propagates changes in structure and dynamics that are important for enzymatic activity.

Xiqing Wang, Pramodh Vallurupalli, Anh Vu, Kwangwoon Lee, Sheng Sun, Wen-Ju Bai, Chun Wu, Hongjun Zhou, Joan-Emma Shea, Lewis E Kay and 1 more

Abstract read
In one paragraph

Article in Biochemistry, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 36 citations in OpenAlex.

  1. Review
  2. Bacterial chemoreceptor signaling complexes control kinase activity by stabilizing the catalytic domain of CheA.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  3. Genome analysis of a halophilicFrontiers in microbiology · 2023
    Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
  9. Conformational shifts in a chemoreceptor helical hairpin control kinase signaling inProceedings of the National Academy of Sciences of the United States of America · 2019
    Article
  10. mBio · 2019
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Bacterial chemoreceptor dynamics correlate with activity state and are coupled over long distances.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 2 countries.

Xiqing WangDepartment of Chemistry and Biochemistry, University of California , Santa Barbara, California 93106-9510, United States.
Pramodh Vallurupalli
Anh Vu
Kwangwoon Lee
Sheng Sun
Wen-Ju Bai
Chun Wu
Hongjun Zhou
Joan-Emma Shea
Lewis E Kay
Frederick W Dahlquist
University of California, Santa Barbara · USUniversity of Toronto · CA

Funding

MECHANISTIC STUDIES OF BACTERIAL CHEMOTAXISR01GM059544 · NIGMS · UNIVERSITY OF OREGON · PI DAHLQUIST, FREDERICK W. · 1999 to 2018
$4.8M
Mechanistic Studies of Bacterial ChemotaxisR56GM059544 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA BARBARA · PI DAHLQUIST, FREDERICK W. · 2008 to 2008
$290k
NIGMS NIH HHS GM59544NIGMS NIH HHS R01 GM059544
6 · The paper itself

Abstract

The histidine kinase, CheA, couples environmental stimuli to changes in bacterial swimming behavior, converting a sensory signal to a chemical signal in the cytosol via autophosphorylation. The kinase activity is regulated in the platform of chemotaxis signaling complexes formed by CheW, chemoreceptors, and the regulatory domain of CheA. Our previous computational and mutational studies have revealed that two interdomain linkers play important roles in CheA's enzymatic activity. Of the two linkers, one that connects the dimerization and ATP binding domains is essential for both basal autophosphorylation and activation of the kinase. However, the mechanistic role of this linker remains unclear, given that it is far from the autophosphorylation reaction center (the ATP binding site). Here we investigate how this interdomain linker is coupled to CheA's enzymatic activity. Using modern nuclear magnetic resonance (NMR) techniques, we find that by interacting with the catalytic domain, the interdomain linker initiates long-range structural and dynamic changes directed toward the catalytic center of the autophosphorylation reaction. Subsequent biochemical assays define the functional relevance of these NMR-based observations. These findings extend our understanding of the chemotaxis signal transduction pathway.

Indexed as

Bacterial ProteinsCatalytic DomainEnzyme ActivationHistidine KinaseModels, MolecularPhosphorylationProtein KinasesProtein MultimerizationThermotoga maritimaBacterial ProteinsHistidine KinaseProtein Kinases

Identifiers

PMID24444349
PMCPMC3985700
OpenAlexW2005952337

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.