Evidence map›Paper›PMID 24443127›Full record

ArticleJournal of computational neuroscience2014

Dynamics of the exponential integrate-and-fire model with slow currents and adaptation.

Victor J Barranca, Daniel C Johnson, Jennifer L Moyher, Joshua P Sauppe, Maxim S Shkarayev, Gregor Kovačič, David Cai

Abstract read
In one paragraph

Article in Journal of computational neuroscience, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
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  7. Article
  8. A Role for Electrotonic Coupling Between Cortical Pyramidal Cells.Frontiers in computational neuroscience · 2019
    Article
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  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Victor J BarrancaMathematical Sciences Department, Rensselaer Polytechnic Institute, Troy, NY, USA, barranca@nyu.edu.
Daniel C Johnson
Jennifer L Moyher
Joshua P Sauppe
Maxim S Shkarayev
Gregor Kovačič
David Cai

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In order to properly capture spike-frequency adaptation with a simplified point-neuron model, we study approximations of Hodgkin-Huxley (HH) models including slow currents by exponential integrate-and-fire (EIF) models that incorporate the same types of currents. We optimize the parameters of the EIF models under the external drive consisting of AMPA-type conductance pulses using the current-voltage curves and the van Rossum metric to best capture the subthreshold membrane potential, firing rate, and jump size of the slow current at the neuron's spike times. Our numerical simulations demonstrate that, in addition to these quantities, the approximate EIF-type models faithfully reproduce bifurcation properties of the HH neurons with slow currents, which include spike-frequency adaptation, phase-response curves, critical exponents at the transition between a finite and infinite number of spikes with increasing constant external drive, and bifurcation diagrams of interspike intervals in time-periodically forced models. Dynamics of networks of HH neurons with slow currents can also be approximated by corresponding EIF-type networks, with the approximation being at least statistically accurate over a broad range of Poisson rates of the external drive. For the form of external drive resembling realistic, AMPA-like synaptic conductance response to incoming action potentials, the EIF model affords great savings of computation time as compared with the corresponding HH-type model. Our work shows that the EIF model with additional slow currents is well suited for use in large-scale, point-neuron models in which spike-frequency adaptation is important.

Indexed as

Adaptation, PhysiologicalModels, NeurologicalNonlinear DynamicsAction PotentialsAnimalsBiophysicsComputer SimulationElectric StimulationMuscarineNerve NetNeuronsPotassiumTime FactorsMuscarinePotassium

Identifiers

PMID24443127
PMCPMC4082791

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.