Evidence map›Paper›PMID 24442890›Full record

ArticleEukaryotic cell2014

A genomewide overexpression screen identifies genes involved in the phosphatidylinositol 3-kinase pathway in the human protozoan parasite Entamoeba histolytica.

Amrita B Koushik, Brenda H Welter, Michelle L Rock, Lesly A Temesvari

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Article
  3. The Role of Acetate Kinase in the Human ParasiteParasitologia (Basel, Switzerland) · 2022
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Phosphatidylinositol Kinases and Phosphatases inFrontiers in cellular and infection microbiology · 2019
    Review
  9. PeerJ · 2017
    Article
  10. Review
  11. Recent advances inF1000Research · 2016
    Review
  12. Review
  13. Article
  14. Systems analysis of host-parasite interactions.Wiley interdisciplinary reviews. Systems biology and medicine
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Amrita B KoushikDepartment of Genetics and Biochemistry, Clemson University, Clemson, South Carolina, USA.
Brenda H Welter
Michelle L Rock
Lesly A Temesvari
Clemson University · US

Funding

Targeted Nano-therapeutics for Neural RegenerationP20GM103444 · NIGMS · CLEMSON UNIVERSITY · PI MARKWALD, ROGER R, VYAVAHARE, NAREN R · 2012 to 2018
$14.9M
A forward genetics screen for genes regulating phagocytosis and signaling in EntaR21AI081100 · NIAID · CLEMSON UNIVERSITY · PI TEMESVARI, LESLY A · 2009 to 2010
$398k
NIAID NIH HHS R21 AI081100NIAID NIH HHS R21 AI081100-01NIGMS NIH HHS P20 GM103444
6 · The paper itself

Abstract

Entamoeba histolytica is a protozoan parasite that causes amoebic dysentery and liver abscess. E. histolytica relies on motility, phagocytosis, host cell adhesion, and proteolysis of extracellular matrix for virulence. In eukaryotic cells, these processes are mediated in part by phosphatidylinositol 3-kinase (PI3K) signaling. Thus, PI3K may be critical for virulence. We utilized a functional genomics approach to identify genes whose products may operate in the PI3K pathway in E. histolytica. We treated a population of trophozoites that were overexpressing genes from a cDNA library with a near-lethal dose of the PI3K inhibitor wortmannin. This screen was based on the rationale that survivors would be overexpressing gene products that directly or indirectly function in the PI3K pathway. We sequenced the overexpressed genes in survivors and identified a cDNA encoding a Rap GTPase, a protein previously shown to participate in the PI3K pathway. This supports the validity of our approach. Genes encoding a coactosin-like protein, EhCoactosin, and a serine-rich E. histolytica protein (SREHP) were also identified. Cells overexpressing EhCoactosin or SREHP were also less sensitive to a second PI3K inhibitor, LY294002. This corroborates the link between these proteins and PI3K. Finally, a mutant cell line with an increased level of phosphatidylinositol (3,4,5)-triphosphate, the product of PI3K activity, exhibited increased expression of SREHP and EhCoactosin. This further supports the functional connection between these proteins and PI3K in E. histolytica. To our knowledge, this is the first forward-genetics screen adapted to reveal genes participating in a signal transduction pathway in this pathogen.

Indexed as

Genome, ProtozoanAmino Acid SequenceChromonesEntamoeba histolyticaMicrofilament ProteinsMolecular Sequence DataMorpholinesPhosphatidylinositol 3-KinasePhosphoinositide-3 Kinase InhibitorsProtein KinasesProtozoan ProteinsSignal Transduction2-(4-morpholinyl)-8-phenyl-4H-1-benzopyran-4-oneChromonesMicrofilament ProteinsMorpholinesPhosphatidylinositol 3-KinasePhosphoinositide-3 Kinase InhibitorsProtein KinasesProtozoan ProteinsRAP kinase

Identifiers

PMID24442890
PMCPMC3957588
OpenAlexW2164880767

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.