Evidence map›Paper›PMID 24440658›Full record

ArticleDevelopmental biology2014

Inducible intestine-specific deletion of Krüppel-like factor 5 is characterized by a regenerative response in adult mouse colon.

Mandayam O Nandan, Amr M Ghaleb, Yang Liu, Agnieszka B Bialkowska, Beth B McConnell, Kenneth R Shroyer, Sylvie Robine, Vincent W Yang

Abstract read
In one paragraph

Article in Developmental biology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
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  9. Article
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  13. Article
  14. Article
  15. KLF5 Governs Stemness in the Adult Intestinal Stem Cell Niche.Cellular and molecular gastroenterology and hepatology · 2020
    Article
  16. Network analysis ofCancer cell international · 2020
    Article
  17. Review
  18. Lipid malabsorption from altered hormonal signaling changes early gut microbial responses.American journal of physiology. Gastrointestinal and liver physiology · 2018
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Mandayam O NandanDepartment of Medicine, Stony Brook University School of Medicine, HSC-T16 Room 020, Stony Brook, NY 11794, USA. Electronic address: Mandayam.Nandan@stonybrookmedicine.edu.
Amr M GhalebDepartment of Medicine, Stony Brook University School of Medicine, HSC-T16 Room 020, Stony Brook, NY 11794, USA. Electronic address: Amr.Ghaleb@stonybrookmedicine.edu.
Yang LiuDepartment of Medicine, Stony Brook University School of Medicine, HSC-T16 Room 020, Stony Brook, NY 11794, USA. Electronic address: yangliu5@ic.sunysb.edu.
Agnieszka B BialkowskaDepartment of Medicine, Stony Brook University School of Medicine, HSC-T16 Room 020, Stony Brook, NY 11794, USA. Electronic address: Agnieszka.Bialkowska@stonybrookmedicine.edu.
Beth B McConnellDivision of Digestive Diseases, Department of Medicine, Emory University School of Medicine, 615 Michael Street, Atlanta, GA 30322, USA. Electronic address: Beth.McConnell@data2impact.com.
Kenneth R ShroyerDepartment of Pathology, Stony Brook University School of Medicine, BST-9, Stony Brook Medicine, Stony Brook, NY 11794-8691, USA. Electronic address: Kenneth.Shroyer@stonybrookmedicine.edu.
Sylvie RobineDepartment of Morphogenesis and Intracellular Signalling, Institut Curie-CNRS, Paris, France. Electronic address: Sylvie.Robine@curie.fr.
Vincent W YangDepartment of Medicine, Stony Brook University School of Medicine, HSC-T16 Room 020, Stony Brook, NY 11794, USA. Electronic address: Vincent.Yang@stonybrookmedicine.edu.
Stony Brook School · USCentre National de la Recherche Scientifique · FREmory University · USStony Brook University · US

Funding

REGULATION OF INTESTINAL EPITHELIAL CELL PROLIFERATIONR01DK052230 · NIDDK · STATE UNIVERSITY NEW YORK STONY BROOK · PI Vincent W Yang · 1997 to 2026
$8.7M
MECHANISMS OF INTESTINAL TUMORIGENESISR01CA084197 · NCI · STATE UNIVERSITY NEW YORK STONY BROOK · PI YANG, VINCENT W · 2000 to 2020
$7.5M
Molecular Mechanisms Regulating Intestinal HomeostasisR01DK093680 · NIDDK · STATE UNIVERSITY NEW YORK STONY BROOK · PI YANG, VINCENT W · 2012 to 2016
$1.7M
NCI NIH HHS R01 CA084197NIDDK NIH HHS R01 DK052230NIDDK NIH HHS R01 DK093680
6 · The paper itself

Abstract

Krüppel-like factor 5 (KLF5) is a pro-proliferative transcriptional regulator primarily expressed in the intestinal crypt epithelial cells. Constitutive intestine-specific deletion of Klf5 is neonatal lethal suggesting a crucial role for KLF5 in intestinal development and homeostasis. We have previously shown Klf5 to play an active role regulating intestinal tumorigenesis. Here we examine the effect of inducible intestine-specific deletion of Klf5 in adult mice. Klf5 is lost from the intestine beginning at day 3 after the start of a 5-day treatment with the inducer tamoxifen. Although the mice have no significant weight loss or lethality, the colonic tissue shows signs of epithelial distress starting at day 3 following induction. Accompanying the morphological changes is a significant loss of proliferative crypt epithelial cells as revealed by BrdU or Ki67 staining at days 3 and 5 after start of tamoxifen. We also observed a loss of goblet cells from the colon and Paneth cells from the small intestine upon induced deletion of Klf5. In addition, loss of Klf5 from the colonic epithelium is accompanied by a regenerative response that coincides with an expansion in the zone of Sox9 expression along the crypt axis. At day 11, both proliferation and Sox9 expression return to baseline levels. Microarray and quantitative PCR analyses reveal an up-regulation of several regeneration-associated genes (Reg1A, Reg3G and Reg3B) and down-regulation of many Klf5 targets (Ki-67, cyclin B, Cdc2 and cyclin D1). Sox9 and Reg1A protein levels are also increased upon Klf5 loss. Lentiviral-mediated knockdown of KLF5 and exogenous expression of KLF5 in colorectal cancer cell lines confirm that Sox9 expression is negatively regulated by KLF5. Furthermore, ChIP assays reveal a direct association of KLF5 with both the Sox9 and Reg1A promoters. We have shown that disruption of epithelial homeostasis due to Klf5 loss from the adult colon is followed by a regenerative response led by Sox9 and the Reg family of proteins. Our study demonstrates that adult mouse colonic tissue undergoes acute physiological changes to accommodate the loss of Klf5 withstanding epithelial damage further signifying importance of Klf5 in colonic homeostasis.

Indexed as

AnimalsAntineoplastic Agents, HormonalCDC2 Protein KinaseCell Line, TumorCell ProliferationColonColorectal NeoplasmsCyclin BCyclin D1Down-RegulationGoblet CellsHCT116 CellsHEK293 CellsHumansKi-67 AntigenKruppel-Like Transcription FactorsAntineoplastic Agents, HormonalCDC2 Protein KinaseCyclin BCyclin D1Ki-67 AntigenKlf5 protein, mouseKruppel-Like Transcription FactorsLithostathinePancreatitis-Associated ProteinsProteinsREG1A protein, humanReg3b protein, mouseREG3G protein, humanRNA, Small InterferingSox9 protein, mouseSOX9 Transcription FactorTamoxifenColonCre recombinaseDifferentiationEpitheliumInducible deletionIntestineKLF5ProliferationReg1ARegenerationSox9

Identifiers

PMID24440658
PMCPMC3949508
OpenAlexW2065548709

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.