Evidence map›Paper›PMID 24440502›Full record

ArticleMolecular cell2014

Early steps in autophagy depend on direct phosphorylation of Atg9 by the Atg1 kinase.

Daniel Papinski, Martina Schuschnig, Wolfgang Reiter, Larissa Wilhelm, Christopher A Barnes, Alessio Maiolica, Isabella Hansmann, Thaddaeus Pfaffenwimmer, Monika Kijanska, Ingrid Stoffel and 8 more

Erratum issuedAbstract read
In one paragraph

Article in Molecular cell, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 201 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
201citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

201 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Guideline
  2. Guideline
  3. Article
  4. Article
  5. Review
  6. Article
  7. Multifunctional Roles of Autophagy in Fungi.Journal of fungi (Basel, Switzerland) · 2026
    Review
  8. Article
  9. Article
  10. Core principles of autophagy initiation mechanisms.Nature structural & molecular biology · 2026
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Mec1-mediated Atg9 phosphorylation regulates the PAS recruitment of Atg9 vesicles upon energy stress.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  17. Article
  18. Review
  19. Article
  20. Article

141 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

18 authors.

Daniel PapinskiMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Martina SchuschnigMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Wolfgang ReiterMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Larissa WilhelmMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Christopher A BarnesDepartment of Biology, Institute of Molecular Systems Biology, ETH Zürich, Wolfgang Pauli Strasse 16, 8093 Zürich, Switzerland.
Alessio MaiolicaDepartment of Biology, Institute of Molecular Systems Biology, ETH Zürich, Wolfgang Pauli Strasse 16, 8093 Zürich, Switzerland.
Isabella HansmannMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Thaddaeus PfaffenwimmerMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Monika KijanskaInstitute of Biochemistry, Department of Biology, ETH Zürich, Schafmattstrasse 18, 8093 Zürich, Switzerland.
Ingrid StoffelInstitute of Biochemistry, Department of Biology, ETH Zürich, Schafmattstrasse 18, 8093 Zürich, Switzerland.
Sung Sik LeeInstitute of Biochemistry, Department of Biology, ETH Zürich, Schafmattstrasse 18, 8093 Zürich, Switzerland.
Andrea BrezovichMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Jane Hua LouDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520, USA.
Benjamin E TurkDepartment of Pharmacology, Yale University School of Medicine, New Haven, CT 06520, USA.
Ruedi AebersoldDepartment of Biology, Institute of Molecular Systems Biology, ETH Zürich, Wolfgang Pauli Strasse 16, 8093 Zürich, Switzerland.
Gustav AmmererMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria.
Matthias PeterInstitute of Biochemistry, Department of Biology, ETH Zürich, Schafmattstrasse 18, 8093 Zürich, Switzerland.
Claudine KraftMax F. Perutz Laboratories, University of Vienna, 1030 Vienna, Austria. Electronic address: claudine.kraft@univie.ac.at.

Funding

Phosphorylation networks regulated by energy stress in yeastR01GM105947 · NIGMS · YALE UNIVERSITY · PI TURK, BENJAMIN E · 2013 to 2016
$1.3M
Austrian Science Fund FWF P 25522HSRD VA HIR 10-001NIGMS NIH HHS R01 GM105947
6 · The paper itself

Abstract

Bulk degradation of cytoplasmic material is mediated by a highly conserved intracellular trafficking pathway termed autophagy. This pathway is characterized by the formation of double-membrane vesicles termed autophagosomes engulfing the substrate and transporting it to the vacuole/lysosome for breakdown and recycling. The Atg1/ULK1 kinase is essential for this process; however, little is known about its targets and the means by which it controls autophagy. Here we have screened for Atg1 kinase substrates using consensus peptide arrays and identified three components of the autophagy machinery. The multimembrane-spanning protein Atg9 is a direct target of this kinase essential for autophagy. Phosphorylated Atg9 is then required for the efficient recruitment of Atg8 and Atg18 to the site of autophagosome formation and subsequent expansion of the isolation membrane, a prerequisite for a functioning autophagy pathway. These findings show that the Atg1 kinase acts early in autophagy by regulating the outgrowth of autophagosomal membranes.

Indexed as

Amino Acid SequenceAminopeptidasesArabidopsis ProteinsAutophagyAutophagy-Related ProteinsBinding SitesConsensus SequenceIntracellular MembranesMass SpectrometryMembrane ProteinsMolecular Sequence DataPhagosomesPhosphorylationProtein KinasesSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsAminopeptidasesArabidopsis ProteinsATG18 protein, S cerevisiaeATG1 protein, S cerevisiaeAtg2 protein, ArabidopsisATG9 protein, S cerevisiaeAutophagy-Related ProteinsMembrane ProteinsProtein KinasesSaccharomyces cerevisiae Proteins

Identifiers

PMID24440502
PMCPMC3978657

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.