Evidence map›Paper›PMID 24438206›Full record

ArticleMicrobiology and immunology2014

Pneumocystis jirovecii colonization is associated with enhanced Th1 inflammatory gene expression in lungs of humans with chronic obstructive pulmonary disease.

Meghan E Fitzpatrick, John R Tedrow, Maria E Hillenbrand, Lorrie Lucht, Thomas Richards, Karen A Norris, Yingze Zhang, Frank C Sciurba, Naftali Kaminski, Alison Morris

Open access · bronzeAbstract read
In one paragraph

Article in Microbiology and immunology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
2.6field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 38 citations in OpenAlex.

  1. Strain-Dependent Protective Innate Immunity AgainstJournal of fungi (Basel, Switzerland) · 2026
    Article
  2. Review
  3. Proteomic Approach to Study the Effect ofJournal of fungi (Basel, Switzerland) · 2025
    Article
  4. Protective innate immunity againstInfection and immunity · 2024
    Article
  5. Role of the FungusInternational journal of molecular sciences · 2024
    Article
  6. Review
  7. Review
  8. Journal of fungi (Basel, Switzerland) · 2023
    Article
  9. Tropical medicine and infectious disease · 2023
    Article
  10. COPD in People with HIV: Epidemiology, Pathogenesis, Management, and Prevention Strategies.International journal of chronic obstructive pulmonary disease · 2023
    Review
  11. Transmission and Colonization ofJournal of fungi (Basel, Switzerland) · 2021
    Review
  12. Review
  13. Chronic obstructive pulmonary disease in HIV.Expert review of respiratory medicine · 2021
    Review
  14. Frontiers in public health · 2019
    Article
  15. Article
  16. Inhibition of C-X-C Motif Chemokine 10 (CXCL10) Protects Mice from Cigarette Smoke-Induced Chronic Obstructive Pulmonary Disease.Medical science monitor : international medical journal of experimental and clinical research · 2018
    Article
  17. Review
  18. Article
  19. Article
  20. A Novel CD4American journal of respiratory and critical care medicine · 2016
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Meghan E FitzpatrickDepartment of Medicine, University of Pittsburgh, 3459 Fifth Avenue, Pittsburgh, Pennsylvania, 15213, USA.
John R Tedrow
Maria E Hillenbrand
Lorrie Lucht
Thomas Richards
Karen A Norris
Yingze Zhang
Frank C Sciurba
Naftali Kaminski
Alison Morris
University of Pittsburgh · US

Funding

Peripheral Markers of Phenotypic Heterogeneity in COPDP50HL084948 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI CHOI, AUGUSTINE M · 2007 to 2012
$12.8M
Molecular Phenotypes within and across disease boundaries in IPF and COPDR01HL095397 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMINSKI, NAFTALI, SHAPIRO, STEVEN D · 2008 to 2011
$3.0M
New Molecular Targets in Pulmonary FibrosisR01HL073745 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KAMINSKI, NAFTALI · 2003 to 2006
$2.8M
Modeling in vivo Protein-DNA Interactions from High-Throughput Data MP1/1R01LM009657 · NLM · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI BENOS, PANAGIOTIS V, KAMINSKI, NAFTALI · 2007 to 2011
$2.5M
Defining the Role of Pneumocystis in COPD PathogenesisR03HL095370 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI MORRIS, ALISON · 2008 to 2009
$152k
Role of Systemic and Pulmonary Immune Aging in HIV-associated COPDF32HL114426 · NHLBI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI FITZPATRICK, MEGHAN E · 2012 to 2013
$126k
NHLBI NIH HHS 1F32HL114426NHLBI NIH HHS F32 HL114426NHLBI NIH HHS N01 HR046163NHLBI NIH HHS N01 HR46163R01NHLBI NIH HHS P50 HL084948NHLBI NIH HHS R01 HL073745NHLBI NIH HHS R01HL073745NHLBI NIH HHS R01 HL095397NHLBI NIH HHS R01HL095397NHLBI NIH HHS R03 HL095370NLM NIH HHS R01 LM009657NLM NIH HHS R01LM009657
6 · The paper itself

Abstract

Chronic obstructive pulmonary disease (COPD) is a complex disease, the pathogenesis of which remains incompletely understood. Colonization with Pneumocystis jirovecii may play a role in COPD pathogenesis; however, the mechanisms by which such colonization contributes to COPD are unknown. The objective of this study was to determine lung gene expression profiles associated with Pneumocystis colonization in patients with COPD to identify potential key pathways involved in disease pathogenesis. Using COPD lung tissue samples made available through the Lung Tissue Research Consortium (LTRC), Pneumocystis colonization status was determined by nested PCR. Microarray gene expression profiles were performed for each sample and the profiles of colonized and non-colonized samples compared. Overall, 18 participants (8.5%) were Pneumocystis-colonized. Pneumocystis colonization was associated with fold increase in expression of four closely related genes: INF-γ and the three chemokine ligands CXCL9, CXCL10, and CXCL11. These ligands are chemoattractants for the common cognate receptor CXCR3, which is predominantly expressed on activated Th1 T-lymphocytes. Although these ligand-receptor pairs have previously been implicated in COPD pathogenesis, few initiators of ligand expression and subsequent lymphocyte trafficking have been identified: our findings implicate Pneumocystis as a potential trigger. The finding of upregulation of these inflammatory genes in the setting of Pneumocystis colonization sheds light on infectious-immune relationships in COPD.

Indexed as

AdultAgedChemokines, CXCFemaleHumansLungMaleMiddle AgedPneumocystis cariniiPneumonia, PneumocystisPulmonary Disease, Chronic ObstructiveTh1 CellsUp-RegulationChemokines, CXCchronic obstructivemicroarrayPneumocystis jiroveciiPulmonary diseaseTh1 cells

Identifiers

PMID24438206
PMCPMC4106795
OpenAlexW1571239990

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.