Evidence map›Paper›PMID 24436055›Full record

ArticleMolecular neurobiology2014

Transcription of the human sodium channel SCN1A gene is repressed by a scaffolding protein RACK1.

Zhao-Fei Dong, Ling-Jia Tang, Guang-Fei Deng, Tao Zeng, Shu-Jing Liu, Rui-Ping Wan, Ting Liu, Qi-Hua Zhao, Yong-Hong Yi, Wei-Ping Liao and 1 more

Abstract read
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In one paragraph

Article in Molecular neurobiology, 2014. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
0.6field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 19 citations in OpenAlex.

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  12. Neogenin in Amygdala for Neuronal Activity and Information Processing.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2018
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Zhao-Fei DongKey Laboratory of Neurogenetics and Channelopathies of Guangdong Province and the Ministry of Education of China, Institute of Neuroscience and the Second Affiliated Hospital of Guangzhou Medical University, 250 Changgang East Road, Guangzhou, 510260, China.
Ling-Jia Tang
Guang-Fei Deng
Tao Zeng
Shu-Jing Liu
Rui-Ping Wan
Ting Liu
Qi-Hua Zhao
Yong-Hong Yi
Wei-Ping Liao
Yue-Sheng Long
Second Affiliated Hospital of Guangzhou Medical University · CNGuangzhou Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Voltage-gated sodium channel α subunit type I (Nav1.1, encoded by SCN1A gene) plays a critical role in the initiation of action potential in the central nervous system. Downregulated expression of SCN1A is believed to be associated with epilepsy. Here, we found that the SCN1A promoter (P1c), located at the 5' untranslated exon 1c, drove the reporter gene expression in human NT2 cells, and a region between nt +53 and +62 downstream of the P1c promoter repressed the promoter activity. Further analyses showed that a scaffolding protein RACK1 (receptor for activated C kinase 1) was involved in binding to this silencer. Knockdown of RACK1 expression in NT2 cells deprived the repressive role of the silencer on the P1c promoter and increased SCN1A transcription, suggesting the potential involvement of RACK1 in negatively regulating SCN1A transcription via interaction with the silencer. Furthermore, we demonstrated that the binding of the protein complex including RACK1 to the SCN1A promoter motif was decreased in neuron-like differentiation of the NT2 cells induced by retinoic acid and resulted in the upregulation of SCN1A transcription. Taken together, this study reports a novel role of RACK1 in regulating SCN1A expression that participates in retinoic acid-induced neuronal differentiation of NT2 cells.

Indexed as

Cell DifferentiationCells, CulturedGene ExpressionGTP-Binding ProteinsHumansMutationNAV1.1 Voltage-Gated Sodium ChannelNeoplasm ProteinsNerve Tissue ProteinsPromoter Regions, GeneticReceptors, Cell SurfaceReceptors for Activated C KinaseRNA, MessengerTranscription, GeneticTretinoinGTP-Binding ProteinsNAV1.1 Voltage-Gated Sodium ChannelNeoplasm ProteinsNerve Tissue ProteinsRACK1 protein, humanReceptors, Cell SurfaceReceptors for Activated C KinaseRNA, MessengerSCN1A protein, humanTretinoin

Identifiers

PMID24436055
OpenAlexW2028568265

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.